| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2639 |
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| Symbol | |
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| ID | 6176020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2931006 |
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| End bp | 2932793 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682415 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001809332 |
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| Protein GI | 172061680 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0601004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.257028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGT ACGCCGCGCC GCTGCGCGAC ATGCAATTCG TGTTGCACGA GCTTCTGAAC
GTCGAAGCCG AGGTCAAGCA AATGCCGCGG CATGCGGACC TCGACGCCGA CACGATCAAC
CAGGTTCTCG AGGAGGCGGG CAAGTTCTGC TCCGAGGTAC TGTTCCCGCT GAACCAGGTC
GGCGACCGCG AAGGCTGTAC GTATGAAGGC GACGGGGTCG TGAAGACCCC GACCGGCTTC
AAGGAAGCGT ACCGGCAGTA CGTCGAGGCC GGCTGGCCGG CGCTCGGCTG CGATCCGGAC
TACGGCGGCC AGGGCCTGCC CGCGTTCGTG AACAACGCGC TCTACGAAAT GCTGAATTCG
GCGAACCAGG CATGGACGAT GTATCCGGGC CTGTCGCACG GCGCGTACGA ATGCCTGCAC
GCGCACGGCG CGCCGGAACT GCAGCAGCAA TATCTGCCGA AGCTCGTGTC GGGCGAATGG
ACGGGCACGA TGTGCCTGAC CGAGCCGCAC TGCGGCACCG ACCTCGGCAT CCTGCGCACC
AAGGCCGAGC CGAACGGCGA CGGCTCCTAC TCGATCAGCG GCACGAAGAT CTTCATCTCG
AGCGGCGAGC ACGACATGTC GAAGAACATC GTCCACCTCG TGCTCGCGCG CCTGCCGGAC
GCGCCGCAAG GCACGAAGGG GATCTCGCTG TTCATCGTGC CGAAGTTCGT GCCGGACGCC
GCGGGCGAGC CGGGCGAGCG CAACGGCATC AAGTGCGGCT CGATCGAGCA CAAGATGGGC
ATCCACGGCA ACTCGACGTG CGTGATGAAC CTCGACAACG CGAAGGGCTG GTTGGTCGGC
GAGCCGAACA AGGGCCTCAA CGCGATGTTC GTGATGATGA ACGCCGCGCG TCTCGGCGTC
GGCATGCAGG GCCTGGGCCT GACGGAAGTC GCGTACCAGA ACTCGCTGGC GTACGCGAAG
GAGCGCCTGC AGATGCGCTC GCTGACGGGC CCGAAGGCAC CGGACAAGCC GGCCGACCCG
ATCATCGTGC ACCCGGACGT GCGTCGCATG CTGCTCACGC AGAAGGCCTA CGCGGAAGGC
GCGCGCGCGT TCACGTACTG GTCCGCGCTG CAGATCGACA AGGAACTGTC GCACGGTGAC
GAAGCGGTGC GCAAGGAAGC GGCCGACCTC GTCGCGCTGC TCACGCCGAT CATCAAGGCG
TTCCTGACCG ACAACGCGTT CGAGTCGACC AACCACGCGA TGCAGATCTA CGGCGGCCAC
GGCTTCATCT CCGAGTGGGG CATGGAGCAG TACGTGCGCG ACGCGCGGAT CAACATGATC
TACGAAGGCA CGAACTCGAT CCAGTCGCTC GACCTGCTGG GCCGCAAGGT GCTCGGCGAC
ATGGGCGCGA AGCTGAAGAA GTTCGGCAAG CTCGTCACCG AATTCGCGGA AGCCGAAGGC
GTGAAGCCGG AGATGGCCGA GTTCATCAAC CCGCTTGCCG ATATCGGCGA CAAGGTGCAG
AAGCTGACGA TGGAAATCGG CATGAAGGCG ATGCAGAACC CGGACGAAGT CGGCGCCGCC
GCCGTGCCGT ACCTGCGCAC CGTCGGCCAT CTGGTGTTCT CGTACTTCTG GGCGCGCATG
GCGCGCATCG CTCTCGACAA CGAAGCGTCG GGAGATCCGT TCTACAAGTC GAAGCTCGCG
ACGGCACGCT TCTATTTCGC GCGCCTGCTG CCCGAGACGG CAGCGACGAT CCGCGCCGCG
CGCGCCGGTT CGAAGACGCT GATGGAAGTC GACGAATCGC TGTTCTGA
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| Protein sequence | MGQYAAPLRD MQFVLHELLN VEAEVKQMPR HADLDADTIN QVLEEAGKFC SEVLFPLNQV
GDREGCTYEG DGVVKTPTGF KEAYRQYVEA GWPALGCDPD YGGQGLPAFV NNALYEMLNS
ANQAWTMYPG LSHGAYECLH AHGAPELQQQ YLPKLVSGEW TGTMCLTEPH CGTDLGILRT
KAEPNGDGSY SISGTKIFIS SGEHDMSKNI VHLVLARLPD APQGTKGISL FIVPKFVPDA
AGEPGERNGI KCGSIEHKMG IHGNSTCVMN LDNAKGWLVG EPNKGLNAMF VMMNAARLGV
GMQGLGLTEV AYQNSLAYAK ERLQMRSLTG PKAPDKPADP IIVHPDVRRM LLTQKAYAEG
ARAFTYWSAL QIDKELSHGD EAVRKEAADL VALLTPIIKA FLTDNAFEST NHAMQIYGGH
GFISEWGMEQ YVRDARINMI YEGTNSIQSL DLLGRKVLGD MGAKLKKFGK LVTEFAEAEG
VKPEMAEFIN PLADIGDKVQ KLTMEIGMKA MQNPDEVGAA AVPYLRTVGH LVFSYFWARM
ARIALDNEAS GDPFYKSKLA TARFYFARLL PETAATIRAA RAGSKTLMEV DESLF
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