Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3957 |
Symbol | |
ID | 4013363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4148702 |
End bp | 4150498 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637943606 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_550749 |
Protein GI | 91789797 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.574903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCAGT ACACCCCACC CCTGCGCGAT ATGCAATTCG TCATGCACGA AGTGCTCAAG GTCACCGATG AATTGAAGGT CTTGCCGCGG CATGCCGACA TCGACGCCGA CACCATCAAT GCGGTGCTTG AAGAAGGCGG AAAGTTTGCG GCTGAAGTCA CCTTCCCGCT CAATATCAGC GGCGACCAGG AAGGCTGCAC GCTCGACAAG ACCACCCATG AAGTCACACC GCCCAAGGGC TTCAAGGAAG CTTATGCGAA GTACGTGGAA GGTGGCTGGG CTGCGTTGAG CTGCGACCCC GAGTACGGCG GCCAGGGCCT GCCCTTTGTC GTCAACCAGT GCTTTTACGA AATGATGAAT TCGGCCAACC AGGCCTGGAC GATGTACCCG GGCCTGTCGC ATGGCGCGTA TGAAGCCCTG CATGCCCACG GCACTGACGA GCAGAAAAAA ACCTACCTGC CCAAGCTGAC CAGCGGCGAG TGGACCGGCA CCATGTGCCT GACCGAGCCG CATTGCGGCA CCGACCTGGG CCTGCTGCGT ACCAAAGCCG AACCCCAGCC TGACGGCACC TACAAGCTCA CCGGCAACAA GATTTTCATC AGCGCCGGCG AGCACGACAT GACCAGCAAC ATCGTGCACC TGGTGCTGGC CCGCCTGCCC GACGCGCCGC AGGGCAGCAA AGGCATCAGC CTGTTCGCCG TGCCCAAGTT CAACGTCAAC AAGGATGGCT CGCTCGGCGC GCGCAACGGC ATTTACTGCG GCGGTATCGA GCACAAGATG GGCATCCACG GCAACTCCAC CTGCCAGATG GTGCTGGAAG ATGCTGTCGG CACCATGGTG GGCGCGCCCA ACAAGGGCCT GGCCGCGATG TTCGTGATGA TGAACGCCGC ACGCCTGGGC GTGGGCAACC AGTCGCTGGG GCTGACCGAA GTGGCTTACC AGAACGCCCT GGCCTATGCC AAGGACCGCA TCCAGATGCG CTCGCTCTCC GGCGTGAAAG CCAAGGACAA ACCGGCCGAC CCCATCATCG TGCACCCCGA TGTGCGCAAG ATGCTGTTGA CCGCCAAGGC CTATGCCGAA GGCGGCCGTG CCCTGGCTAT TTACTGCACG CTGCTGCTCG ACAAGGAACT CCACCACCCC GACGAAAAGG TGCGGAAGGA GTCCGGCGAA ATCGTCGCCC TGCTCACGCC CATCGTCAAG GCCTTCCTGA CCGACAACGG CCACATTGCC ACCAATGCCT GCATGCAGGT CTTCGGCGGC CACGGCTTCA TCAAGGAATG GGGCATGGAG CAGTTTGTGC GCGACAACCG CATCAACATG ATTTATGAGG GCACCAACAC CGTCCAGTCG CTGGACCTGC TGGGCCGCAA GATCCTGGGC AACAACGGCG CCACGCTGAA GAAATTCGGC AAGCTGATCG GCGCCCTGAT CGAGGAAGAA GGCGTCAACG AGAAGATGGC CGAGTTCATC AACCCGCTGG CGTACCTGGC CGACCAGATG ACCAAGTTCA CGACCGAGCT CGGCTTCAAG GGTTTCCAGA ACCCCGACGA AGTGGGCGCT GCCGCGGTCG ACTACCTGCG GGTCGCCGGC CACCTGGTGT TCGGCTACTT CTGGGCCCGC ATGGCACAGG TCGCGCTGCG CGAGATTGCC GCCGGCAACC CCGACAAGTT CTACCTGGCC AAGCTGCAAA CCGCGCGCTT TTACTTCGCC AAGCTCTTCC CCGAGACCGC GACGCTGATG CGCACCGCGC GCTCAGGCAG CAAGGCGCTG ATGGATACCG ACGAGGCGCT GGCTTGA
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Protein sequence | MPQYTPPLRD MQFVMHEVLK VTDELKVLPR HADIDADTIN AVLEEGGKFA AEVTFPLNIS GDQEGCTLDK TTHEVTPPKG FKEAYAKYVE GGWAALSCDP EYGGQGLPFV VNQCFYEMMN SANQAWTMYP GLSHGAYEAL HAHGTDEQKK TYLPKLTSGE WTGTMCLTEP HCGTDLGLLR TKAEPQPDGT YKLTGNKIFI SAGEHDMTSN IVHLVLARLP DAPQGSKGIS LFAVPKFNVN KDGSLGARNG IYCGGIEHKM GIHGNSTCQM VLEDAVGTMV GAPNKGLAAM FVMMNAARLG VGNQSLGLTE VAYQNALAYA KDRIQMRSLS GVKAKDKPAD PIIVHPDVRK MLLTAKAYAE GGRALAIYCT LLLDKELHHP DEKVRKESGE IVALLTPIVK AFLTDNGHIA TNACMQVFGG HGFIKEWGME QFVRDNRINM IYEGTNTVQS LDLLGRKILG NNGATLKKFG KLIGALIEEE GVNEKMAEFI NPLAYLADQM TKFTTELGFK GFQNPDEVGA AAVDYLRVAG HLVFGYFWAR MAQVALREIA AGNPDKFYLA KLQTARFYFA KLFPETATLM RTARSGSKAL MDTDEALA
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