| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0515 |
|---|
| Symbol | |
|---|
| ID | 4656213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 587244 |
|---|
| End bp | 589019 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639810467 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_957803 |
|---|
| Protein GI | 120553452 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATACC AGGCACCAGC GAACGATCTT CGCTTTCTGT TGTTTGATGT GTTGGGTGCA
GACAAGCTGC ACGAGCTGGA AAAGTATGCC GATGCCACAC CCGACCTGAT CTCCGCGGTC
ATTGATGAGG CCGGCAAGCT GGCGGCAGAG GTCATTCAGC CCACCAACCA GGTTGGCGAC
CGTCAGGGCT GCAGCTACGA CCCCGAAACC AAACTGGTCA AGACTCCAGA CGGCTTCAAA
GAGGCCTATC AGAAGTTTGT CGAAGGTGGC TGGACCGCAC TGGACGCGCC ACTGGAGTTT
GGCGGCCAGG GCCTGCCTCA CACGCTGAAA TTCGTGGTGG ACGAGATGGT GTGCTCCACC
AACCTGTCGC TGGGCATGTA CCCCGGCCTG ACGCATGGTG CCATCAGCGC CCTCTATGCC
CACGGCTCGG AAGAGCTTAA GCAGACGTAT CTGGAAAAAC TGATTTCCGG CGAATGGACC
GGCACCATGT GCCTGACCGA GCCCCATTGT GGCACCGATC TGGGCCTGAT TCGCACCAAA
GCCACGCCGA ATGATGATGG CAGCTACGCG ATTGAGGGCA CCAAAATCTG GATCACCGGC
GGTGAGCACG ATCTGGTGGA CAACATTGTC CATCTGGTGC TGGCCAAGTT GCCGGGCGCG
CCAGACACCA CCAAAGGGAT TTCCCTGTTT GTGGTACCCA AGTTCCTGCC AGACTCCGGT
GAGCGCAACC CGGCCTTCTG TGGTGGCCTG GAACACAAGA TGGGCATCAA GGGTTCCGCC
ACCTGCGTTA TGAACTTTGA AGGCGCCAAG GGCTGGCTGG TGGGCGAGCC CAACAAGGGC
ATGAGCGCCA TGTTCACCAT GATGAACGAA GCCCGTCTGA TGGTGGGCAT GCAGGGCCTG
GGCCTGGCGG AAATGGCCTA CCAGGAGAGC CTGGCCTTCG CCAGAGAGCG TCTGCAAAGC
CGCTCCCTGA GTGGCCCGAA AAACCCCGAC GGCCCCGCCG ACCCGATCAT TGTGCACCCG
GATGTACGTC GCATGCTGAT GCGCCAGAAA GTGCTGAACG AGGGCATGCG TGCGCTGGCA
CTGTTTACCG GCCACCAACT GGATCTCTCG GTGGCACACC CGGACGAAGA GGTTCGTGAA
AACGCCGACG ACCTGGTACA GCTGCTGACG CCGGTGGTCA AAGCCTTCCT GACCGATGAG
GGCTACAACA ACGCCAACTG GGGCCAGCAG GTGCTGGGTG GCTCCGGCTT CACCCAGGAC
TGGCCGCTGG AACAACTGGT ACGCGATGGC CGTATCGCCC GTATCTACGA GGGCACCAAC
GGCATCCAGG CGATGGATCT GGTGGGCCGC AAACTGTCGC TGAAGGGCGG GCAACTGGTA
CGCGCCCTGT TTGCCGAGCT GACGGGTTAC CTGAAAGACA ATCCTGATGC GCCCTACCGG
GAAGAACTGA AAGGCGCCGT CAAGGGTCTT GAGCAGGCCA CTCTGTGGCT GGCCCAGAAT
GCCCCGAAAG ATCCGGAGCA GGCTGGCGCT GCGGCAACAC CATATCTGCG TCTGACAGCC
CTGACCGTCA TCGGCTATCT GTGGTCCCGC ATGGCTGCGG TGGCTGGCCA GCAGCTCGAA
GCAGGCGCAG GTAACAAGCC ACTACTGGAA AGCAAGCAGG TATCCGCCCG TTTCTATTTC
GAGAAACTGA TGCCCGAGGC GGACTGGCTG CTACGGGATA TCCAGTCCGG CAAAGACAGC
CTGATGGCCC TGGAAGATGA GCAGTGGATG GCCTAA
|
|---|
| Protein sequence | MQYQAPANDL RFLLFDVLGA DKLHELEKYA DATPDLISAV IDEAGKLAAE VIQPTNQVGD
RQGCSYDPET KLVKTPDGFK EAYQKFVEGG WTALDAPLEF GGQGLPHTLK FVVDEMVCST
NLSLGMYPGL THGAISALYA HGSEELKQTY LEKLISGEWT GTMCLTEPHC GTDLGLIRTK
ATPNDDGSYA IEGTKIWITG GEHDLVDNIV HLVLAKLPGA PDTTKGISLF VVPKFLPDSG
ERNPAFCGGL EHKMGIKGSA TCVMNFEGAK GWLVGEPNKG MSAMFTMMNE ARLMVGMQGL
GLAEMAYQES LAFARERLQS RSLSGPKNPD GPADPIIVHP DVRRMLMRQK VLNEGMRALA
LFTGHQLDLS VAHPDEEVRE NADDLVQLLT PVVKAFLTDE GYNNANWGQQ VLGGSGFTQD
WPLEQLVRDG RIARIYEGTN GIQAMDLVGR KLSLKGGQLV RALFAELTGY LKDNPDAPYR
EELKGAVKGL EQATLWLAQN APKDPEQAGA AATPYLRLTA LTVIGYLWSR MAAVAGQQLE
AGAGNKPLLE SKQVSARFYF EKLMPEADWL LRDIQSGKDS LMALEDEQWM A
|
|---|
| |