Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0131 |
Symbol | |
ID | 5897843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 144213 |
End bp | 146003 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641560616 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001681767 |
Protein GI | 167644104 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.723341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTACC AGCCGCCCGT TCGCGAACAC GCCTTCCTCC TGCGCGACGT GCTCAACATC GACCAGCACG GCAATCTGCC CAGCTTCGCC GACGCCTCGT TCGAGACGGT CGAGCAGATC CTGGAGGCCG CCGCCCAGTT CACCGGCGAG GTCCTGGCCC CGTTGAACCA TGTCGGCGAC CAGCAGGGCT GCGTCTGGAA CAAGGACTTC ACGGTCAAGA CGCCGGACGG CTTCGCCGCC GCCTACAAGC AGCTGTGCGA AGGCGGCTGG ACGGGCCTGG GATCCGACCC CGCCTATGGC GGCCAGGGCC TGCCCCACGT CGTCAACCTG GCCTTCAGCG AGATGAGCTC GTCGGCCAAC ATGGCGTTCT CGATGTATCC GGGCCTGGCT CACGGCGCCT ATTCGGCCAT CCACACCGGC GGCAGCGACC AGCAGAAAGA CCTCTACCTG CCCAAGATGG TCTCGGGCGA GTGGACCGGC ACCATGAACC TGACCGAGCC GCACTGCGGC ACGGACCTGG GCCTGCTGCG CACCAAGGCG GTTCCAGAAG CCGACGGAAG CTACCGCATC ACCGGCCAGA AGATCTGGAT CTCGGCCGGC GAGCACGACA TGGCCGACAA CATCGTCCAC CTGGTGCTGG CCCGCATCGA GGGCGCCCCG GCCGGCGTGA AGGGCATCAG CCTGTTCATC GTGCCCAAGT TCCTGCCCAA GGAAGACGGC TCGGTCGGTC CGCGCAACGA GGGCGTCAAG TGCGTCGGCC TCGAAGAGAA GATGGGCATC CACGGCAACG CCACCTGCGT CATGCAGTAC GAGGACGCCA AGGGCTGGCT GATCGGTGAA GAGAACAGCG GCCTGAAGCT GATGTTCGTG ATGATGAACG AGGCCCGGCT CGGCGTCGGC CTGCAGGGCA TCGCCCAGGC CGAGGCCGCC TACCAGGCCG CCGTCGCCTT CGCCAAGGAC CGCCTGCAAG GCCGCTCGCT GACCGGCCCG AAGAACCCCG AAGGCCCGGC CGACCCGATC ATCGTCCACC CGGACGTGCG TCGCATGCTG CTGGAGAGCA AGGCCCTGAT CGAAGGCGGT CGCGCCTTCC TGTTCTGGAC CGCCCTGCAC GGCGACCTGG CGCACCAGCA CCCGGACGAG GCCACCCGCG CCAAGGCCGA GGACTATATG GGCCTGATGA CCCCGGTGCT GAAAGGCTAC CTGACCGACA AGGGCTTCAA GATCTGCTCG GACGCCATGC AGGTGCACGG CGGCAGCGGC TTCACCGAGC ACTTCCCGGC CAGCCAGTAC CTTCGCGACG TCCGCATCGC CCTGATCTAC GAAGGCACCA ACGGCATCCA GGCGCTGGAC CTGGTCGGCC GCAAGCTGGC CTCCAAGGGC GGCCGGGCGG TGATGACCTT CTTCCAGGAG GTCGACCAGT TCATCGGCGA GAACGACGGC GACGCCGAGC TGAAGCCGTT CGTCGAGGCC CTGGCCGGTG TGAAGGCCCA ACTGCAGGAC GGCACCATGT GGCTGATGCA GAACGGCCTG CAGAACCCCG ACAACGCCGG CGCGGCCTCG ACCGACTACA TGCACCTCTT CGGCCTCACG GGCCTGGCCT ACATGTGGTG CTTGATGGTC AAGGCGGCCA ACGCCAAGAT CGCGGCCGGT TCCTCGGACC CGTTCTTCAC CACCAAGATC GTCACGGCGA AATATTTCAT CGAGCGCATC TTGCCTGACG CAGGGGCGCA TCTGGCCAAG CTTAAGACCG GCTCGGCCAC CCTGATGGCC CTGCCCGCGG AGGCCTTCTG A
|
Protein sequence | MTYQPPVREH AFLLRDVLNI DQHGNLPSFA DASFETVEQI LEAAAQFTGE VLAPLNHVGD QQGCVWNKDF TVKTPDGFAA AYKQLCEGGW TGLGSDPAYG GQGLPHVVNL AFSEMSSSAN MAFSMYPGLA HGAYSAIHTG GSDQQKDLYL PKMVSGEWTG TMNLTEPHCG TDLGLLRTKA VPEADGSYRI TGQKIWISAG EHDMADNIVH LVLARIEGAP AGVKGISLFI VPKFLPKEDG SVGPRNEGVK CVGLEEKMGI HGNATCVMQY EDAKGWLIGE ENSGLKLMFV MMNEARLGVG LQGIAQAEAA YQAAVAFAKD RLQGRSLTGP KNPEGPADPI IVHPDVRRML LESKALIEGG RAFLFWTALH GDLAHQHPDE ATRAKAEDYM GLMTPVLKGY LTDKGFKICS DAMQVHGGSG FTEHFPASQY LRDVRIALIY EGTNGIQALD LVGRKLASKG GRAVMTFFQE VDQFIGENDG DAELKPFVEA LAGVKAQLQD GTMWLMQNGL QNPDNAGAAS TDYMHLFGLT GLAYMWCLMV KAANAKIAAG SSDPFFTTKI VTAKYFIERI LPDAGAHLAK LKTGSATLMA LPAEAF
|
| |