| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0394 |
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| Symbol | |
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| ID | 5194670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 455352 |
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| End bp | 457157 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584840 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001265751 |
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| Protein GI | 148545649 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACT ACAAAGCCCC CTTGCGTGAT ATCCGCTTCG TTCGCGACGA GCTGCTTGGC
TATGAGGCGC ACTATCAGAG CCTGCCGGGC TGCCAGGACG CCACGCCCGA TATGGTCGAC
GCGATCCTTG AAGAAGGCGC GAAGTTCTGT GAGCAGGTGT TGTCGCCGCT GAACCGCGTG
GGTGACCAGG AAGGCTGCAC CTGGAGCGAA TCGGGGGTGA AAACCCCAAC CGGCTTCAAG
GAAGCCTACC AGCAGTTCGT CGAAGGCGGC TGGCCGAGCC TGGCACATGA CGTCGAGCAT
GGCGGCCAAG GCCTGCCAGA GTCGCTGGGC CTGGCCCTGA GCGAAATGGT CGGTGGCTCG
AACTGGTCGT GGGGTATGTA CCCAGGCCTG TCGCATGGCG CGATGAACAC TATTTCTGCG
CATGGCACTG CCGAGCAGCA GCACACCTAC CTGACCAAGC TGGTGTCCGG CGAGTGGACC
GGCACCATGT GCCTGACCGA ACCGCACTGC GGCACCGACC TGGGCATGCT GCGCACCAAG
GCCGAGCCAC AGGCCGACGG CAGCTACAAA GTGTCGGGCA CCAAGATCTT CATCTCGGCC
GGTGAGCACG ACATGGCCGA CAACATTGTC CATATCGTCC TGGCCCGCCT GCCGGACGCA
CCGGCCGGCA CCAAGGGTAT TTCACTGTTC ATCGTGCCGA AGTTCCTGCC CAACGCCGAA
GGCGGTGTGG GCGAGCGCAA CGGCGTGAGC TGCGGCTCGA TCGAACACAA GATGGGCATC
CACGGTAACG CCACCTGCGT CATGAACTTC GATGCGGCCA CCGGCTACCT GATCGGCCCA
GCCAACAAAG GCCTGAACTG CATGTTCACC TTCATGAACA CTGCTCGCCT GGGTACCGCG
CTGCAAGGCC TGGCCCACGC CGAGGTGGCG TTCCAGGGTG GCCTGAAGTA CGCCCGTGAG
CGCCTGCAGA TGCGTTCCCT GACCGGTCCG AAAGCACCGG ACAAGGCCGC TGACCCGATC
ATCGTCCATC CCGACGTGCG CCGCATGCTG CTGACCATGA AGGCCTTCGC CGAAGGCAAC
CGCGCGATGG TGTACTTCAC TGCCAAGCAG GTGGACATCG TCAAGTACAG CCAGGACGAA
GAAGAGCGCA AGAAGGCTGA CGCCCTGCTG GCGTTCCTGA CCCCGATCGC CAAGGCATTC
ATGACCGAAG TCGGTTTCGA AGCCGCCAAC CACGGCGTAC AGATCTACGG CGGCCATGGC
TTCATCGCCG AATGGGGCAT GGAGCAGAAC GTGCGCGACA GCCGTATCTC CATGCTGTAC
GAAGGCACTA CCGGTATTCA GGCCCTCGAC CTGCTCGGTC GCAAAGTGCT GATGACTCAG
GGCGAAGCAC TGAAGGGCTT CACCAAGATC GTGCACAAGT TCTGCCAGGC GCAGGAAGGT
AACGAAGCGG TCAAGGAGTT CGTCGAACCG CTGGCGGCCA TCAACAAGGA GTGGGGCGAG
CTGACCATGA AAGTGGGCAT GGCTGCCATG AAGGACCGTG AAGAAGTGGG TGCGGCTTCG
GTCGATTACC TGATGTACTC CGGCTATGCC TGCCTGGCTT ACTTCTGGGC CGACATCGCC
CGTCTGGCCG CCGAGAAACT GGCAGCCGGT ACCAGCGAGG AGGCGTTCTA CACCGCCAAG
CTGCAGACTG CCCGCTTCTA CTTCCAGCGC ATCCTGCCAC GTACCCGTAC CCATGTGGCG
ACCATGCTGT CGGGCGCCAA CAACCTGATG GCGATGGACG AAGAGCACTT CGGCCTGTCG
TACTGA
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| Protein sequence | MPDYKAPLRD IRFVRDELLG YEAHYQSLPG CQDATPDMVD AILEEGAKFC EQVLSPLNRV
GDQEGCTWSE SGVKTPTGFK EAYQQFVEGG WPSLAHDVEH GGQGLPESLG LALSEMVGGS
NWSWGMYPGL SHGAMNTISA HGTAEQQHTY LTKLVSGEWT GTMCLTEPHC GTDLGMLRTK
AEPQADGSYK VSGTKIFISA GEHDMADNIV HIVLARLPDA PAGTKGISLF IVPKFLPNAE
GGVGERNGVS CGSIEHKMGI HGNATCVMNF DAATGYLIGP ANKGLNCMFT FMNTARLGTA
LQGLAHAEVA FQGGLKYARE RLQMRSLTGP KAPDKAADPI IVHPDVRRML LTMKAFAEGN
RAMVYFTAKQ VDIVKYSQDE EERKKADALL AFLTPIAKAF MTEVGFEAAN HGVQIYGGHG
FIAEWGMEQN VRDSRISMLY EGTTGIQALD LLGRKVLMTQ GEALKGFTKI VHKFCQAQEG
NEAVKEFVEP LAAINKEWGE LTMKVGMAAM KDREEVGAAS VDYLMYSGYA CLAYFWADIA
RLAAEKLAAG TSEEAFYTAK LQTARFYFQR ILPRTRTHVA TMLSGANNLM AMDEEHFGLS
Y
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