| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2552 |
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| Symbol | |
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| ID | 4479214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3053218 |
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| End bp | 3055008 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727155 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_870185 |
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| Protein GI | 117920993 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0690519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCT ATCAAGCACC ACTACGTGAC TATCAATTTA TCCTCGATGA AATGTTGCAT
ATTTATCAGC AAGATGCTCT TAAAGGCTTC GATGAAATCG ACCCCGATCT GGTCGATGCC
ATCCTGCAAG GTATGGCGGA TTTTAGTACT GAGGTGATGT TGCCGTTAAA TAGCGTGGGG
GATGTGCAGG GGTGCAAACT CGTTGATGGC AAAGTGGTTA CCCCAGAAGG TTTTGCCGAC
GCCTATCAGC AGTTTGTCGA CAATGGATGG CCGACACTGA CCTGCGATCC CGCCTATGGT
GGTCAAGGAC TGCCCGAAGT GGTCGGGATT TTTGCGACCG AGATGCAAAC CTCGACCAAC
ATGGCCTTTG CCATGTATCC CGGCCTTACC CATGGCGCCT ATTCGGCCAT TCACGCCCAC
GGCAGTGAGG CACTTAAACA GAAATATTTA GCCAAATTAG TGAGTGGTGA ATGGACTGGC
ACCATGAACC TCACCGAATC CCATGCCGGA ACCGATTTAG CGCTACTGCG CACTAAGGCC
GTTCCCACGG CGGACGGCTA CTTTGCCATC ACTGGGGAGA AGATTTTTAT TTCCTCGGGC
GACCATCAAT TTACCGATAA CATAGTGCAT CTGGTACTCG CCCGTTTACC CGACGCGCCC
GAAGGTGTGA AGGGGATTTC GCTGTTTGCC GTGCCCAAAG TGTTAGTGAA CAGTGATGGC
AGTTTAGGTG AGGCGAACAG CCTCTATGCT AGCGGCCTTG AGCACAAAAT GGGGATCCAC
GGCAACTCAA CCTGCGTGAT GGTATTTGAG GGGGCACTCG GTGAGTTAGT CGGCGAACCC
CACCAAGGTC TGCGCGCCAT GTTTACCATG ATGAACCAAG CACGCTTAGG TGTTGGGATG
CAGGGGTTAG GCGTGTCCGA AATCGCCTAT CAAAGCGCCT TGGCCTACGC CAAGGACAGA
TTGCAGAGCC GCGCCATTAG TGGGGCTAAG GCGCCCGAAA AAGCCGCCGA TCCGATTTTG
GTGCACGGTG ATGTGCGCCG GATGTTGTTA TCGCAAAAAG CCTTTAACGA AGGTGCCCGT
GCACTCGTTG GCCAGCAGGC GCTGTGGCTC GATGAGGCAG AGCGCCATAG CGATCCTGCC
AAAGCAAAAG TGGCTGCCCA ATTAGCGGCG TTATTTACCC CTGTGGTGAA AGGCTTTATC
ACAAACCGTG GTTTTAACGC CTGTGTGGAT GCACAGCAAG TATTTGGCGG CCATGGCTAT
ATCCACGAGT GGGGCATGGA GCAATTCGTG CGTGATAGCC GTATCGCTTT GATTTATGAA
GGCACAAATG GCATTCAGGC GCTCGATTTA GTTGGGCGTA AGCTGCTGAG CGATCGCGGC
GCCGCCATGC AGCAATGGTC TGCGCTAGTG ACTGAGTTTA TTCAATCACA GGGCAAAGAT
CCGCAAATGC AGCCCTATAT CAGTGGGCTA ATGGATTGCG CCACCGATTT ACAAAAGGCG
AGCGGTTATT TAGCGACCCA TGCGGCTAGC AATCCCGACA TTATCGGCGC GGCATCGATG
GCGTATCTCG AGTTATTTGG CATTACTGCC CTTGCCTGGA TGTGGGCGCG TATGGCGAAG
ATTGCCCTGA CTGCACTCGA AAATGGCACG CAAGAGTCCA ATTTTTACCA AGCTAAACTG
AAAACGGCGG ACTTTTATAT GGCGTATTGG GCCGTGCAGA GCCGCAGTCT GCGTAAACAG
TTGGAGCAGG CGAGTGAGAT GTTAACCACG CTCGATGAGG CGATTTTTTA A
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| Protein sequence | MPVYQAPLRD YQFILDEMLH IYQQDALKGF DEIDPDLVDA ILQGMADFST EVMLPLNSVG
DVQGCKLVDG KVVTPEGFAD AYQQFVDNGW PTLTCDPAYG GQGLPEVVGI FATEMQTSTN
MAFAMYPGLT HGAYSAIHAH GSEALKQKYL AKLVSGEWTG TMNLTESHAG TDLALLRTKA
VPTADGYFAI TGEKIFISSG DHQFTDNIVH LVLARLPDAP EGVKGISLFA VPKVLVNSDG
SLGEANSLYA SGLEHKMGIH GNSTCVMVFE GALGELVGEP HQGLRAMFTM MNQARLGVGM
QGLGVSEIAY QSALAYAKDR LQSRAISGAK APEKAADPIL VHGDVRRMLL SQKAFNEGAR
ALVGQQALWL DEAERHSDPA KAKVAAQLAA LFTPVVKGFI TNRGFNACVD AQQVFGGHGY
IHEWGMEQFV RDSRIALIYE GTNGIQALDL VGRKLLSDRG AAMQQWSALV TEFIQSQGKD
PQMQPYISGL MDCATDLQKA SGYLATHAAS NPDIIGAASM AYLELFGITA LAWMWARMAK
IALTALENGT QESNFYQAKL KTADFYMAYW AVQSRSLRKQ LEQASEMLTT LDEAIF
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