| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1852 |
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| Symbol | |
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| ID | 5662247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2253169 |
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| End bp | 2254959 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236442 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001501710 |
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| Protein GI | 157961676 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.265206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATTT ACCAAGCGCC TATCCGCGAT TATCAGTTTG TACTAGGTGA ACTACTCAAT
ATTTATCAGC AAGATAACCT AAGTGGTTTT GACGAATTCG ATCCAGAGTT GATTGATGCA
GTGCTTCAGG GCGTCGCCGA TTTTACAACC GACATTATGT TGCCGTTAAA TGGTAGTGGC
GATGTAGAGG GGTGTCGTTT GGTAGAGGGA AAGGTGATCA CCCCTCAAGG CTTCATCGAT
GCTTATCAGC AGTACGTTGA TAATGGCTGG GCAACCTTAA CCTGCGATCC CGAATATGGT
GGGCAAGGGT TGCCGGAAGT GGTGGGTATT TTTGCCACCG AGATGAAAAC GGCGACCAAT
ATGGCGTTCG CCATGTACCC CGGCCTGACT CATGGTGCCT ACGCTGCAAT TCACGCTCAC
GGCAGTGAAG CATTGAAAGC CAAGTATTTA GACAAGCTGG TTAGCGGCGA GTGGACCGGT
ACCATGAATT TAACAGAGTC CCATGCGGGC ACCGACTTAG CTTTACTGCG TACCAAAGCT
ATCCCAACTG GTGACGGCAA TTACAGCATC ACTGGAGAGA AGATATTTAT CTCTTCTGGC
GATCATGACT TAACCGATAA CATTGCCCAT TTAGTGTTAG CCAGACTGCC CGATGCCCCA
GAAGGCGTAA AAGGGATCTC TCTGTTTGTG GTACCTAAAA TCTTAATTAA TGACGATGGC
AGCTTAGGCG AATCAAATAG TCTTTATGCG GCCAGTCTAG AGCATAAAAT GGGGATCCAC
GGTAACTCTA CCTGTGTGAT GAATTTTGAC GCTGCAATAG GTGAGCTAGT GGGCGAGGCG
CACCAAGGTC TAAGAGCCAT GTTCACCATG ATGAACCAGG CAAGACTAGG GGTTGGAGTA
CAGGGGCTAG GTGTGTCTGA AATTGCTTAC CAAAATGCCG TCGCTTACGC CAAAGACCGC
ATTCAAGGTC GTGCTTTAAG TGGCGTGAAG CAACCTGAGC AAGCGGCCGA TTCAATATTA
GTTCATGGTG ATGTACGTCG TATGTTGCTA TCACAAAAGG CCTTTAACCA AGGTACGCGT
GCATTAATGG GGCAGCAAGC GCTTTGGCTT GATCAGGCAC AAAGGGATTG CTCCCCCGAG
CAAGCTAAGG CCGCATCTAA ACTGGCCGCA CTGTTTACAC CGATTGTGAA AGGCTTCGTG
ACAGATCAAG GTTTTAAAGC CTGCGTCGAT GCCCAACAAG TATTTGGTGG CCATGGTTAT
ATCCATGAAT GGGGCATGGA GCAATTTGTG CGTGATAGTC GTATTGCGAT GATCTATGAG
GGAACCAATG GGGTACAGGC ATTGGATCTT GTAGGACGAA AAATATTGTC AGATAAAGGT
GCGACGTTGC AAGCATGGTC TGGGCAAGTA AAACAACTTA TCCAAAGTAA TATAGCCAAT
GAGGCTATGA AACCTTACCT TGACGGGCTG ATGGATGCGG CCGGCGATCT TGAAAAGGCC
ACTGGTTATA TTGCTACTAA TGCAAGTAAG AACCCAGATC TTATCGGCGC TGCATCAATG
CCTTATATGC AGATCTTAGG GATCACGGCA TTAGCGTGGA TGTGGACGCG CAGCGCCGAA
ACTGCGCTAG CGGCTTTGGC CAATGGCAGC GATGAAGTGG CGTTTTACCA AGATAAGTTA
AACACGGCGC AGTTTTACAT GAACTATTGG GCGGTACAGA CCCGTAGTTT GCGTAAACAG
ATCCAAGCGG CAAGCGAAGG GATCATGGCA TTTGATGACA GTGCCTTTTA A
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| Protein sequence | MPIYQAPIRD YQFVLGELLN IYQQDNLSGF DEFDPELIDA VLQGVADFTT DIMLPLNGSG
DVEGCRLVEG KVITPQGFID AYQQYVDNGW ATLTCDPEYG GQGLPEVVGI FATEMKTATN
MAFAMYPGLT HGAYAAIHAH GSEALKAKYL DKLVSGEWTG TMNLTESHAG TDLALLRTKA
IPTGDGNYSI TGEKIFISSG DHDLTDNIAH LVLARLPDAP EGVKGISLFV VPKILINDDG
SLGESNSLYA ASLEHKMGIH GNSTCVMNFD AAIGELVGEA HQGLRAMFTM MNQARLGVGV
QGLGVSEIAY QNAVAYAKDR IQGRALSGVK QPEQAADSIL VHGDVRRMLL SQKAFNQGTR
ALMGQQALWL DQAQRDCSPE QAKAASKLAA LFTPIVKGFV TDQGFKACVD AQQVFGGHGY
IHEWGMEQFV RDSRIAMIYE GTNGVQALDL VGRKILSDKG ATLQAWSGQV KQLIQSNIAN
EAMKPYLDGL MDAAGDLEKA TGYIATNASK NPDLIGAASM PYMQILGITA LAWMWTRSAE
TALAALANGS DEVAFYQDKL NTAQFYMNYW AVQTRSLRKQ IQAASEGIMA FDDSAF
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