| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1916 |
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| Symbol | |
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| ID | 6116179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2361952 |
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| End bp | 2363742 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633419 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001760295 |
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| Protein GI | 170726269 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.839569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.565849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAT ATCAAGCACC ACTTCGTGAT TATCAATTTG TATTAAATGA GTTACTTAAT
ATCTATGAAG AGAGTGAGTT ACAGGGATTC GATGAGATTG ATGCAGATCT TGGCGATGCC
ATTCTTCAAG GTGTGGCAGA CTTTGCTACC GAGATCATGC TACCGCTAAA CAGTAGTGGT
GATGTCGAAG GTTGTAAGTT GCTTGATGGT CATGTTATTG CACCTAAGGG CTTTAAGGAA
GCTTACCAGC AGTATGTGGA TAATGGCTGG GGCACTTTGA CCTGTGATCC TGAGTTTGGT
GGCCAGGGAC TTCCTGAAGT TATTGGTGTG TTTGCAACCG AGATGAAAAC CGCTACTAAC
ATGGCGTTTG CCATGTATCC AGGGTTAACT CATGGCGCTT ATGCTGCGAT ACATGCACAT
GGAAGTGACG CATTAAAGCA GAAATATTTA GAAAAACTGG TGACAGGTGA ATGGACTGGG
ACCATGAACC TGACAGAGTC ACATGCGGGT ACAGATCTGG CGCTACTGCG CACAAAAGCT
GTCGATGCAG GTGAGGGGTT TTTTGCTATT TCAGGTGAAA AGATATTTAT CTCATCTGGT
GATCATGATT TAGCCGAAAA TATCATACAT CTAGTGCTAG CCAGACTACC CGATGCACCG
GCAGGGGTGA AAGGGATCTC TCTGTTTGCA GTGCCTAAAT ATCTCGTCAA TGACGATGGC
AGTATTGGTG ATGCTAACAA ATTGTGTGCG ACTGGGCTCG AGCATAAAAT GGGGATCCAC
GGAAACTCAA CCTGTGTGAT GAACTTTGAT GGAGCACTCG GTGAGCTAGT GGGCGAGCCT
CATCAAGGCT TACGTGCCAT GTTTACCATG ATGAATCAGG CCAGATTAGG AGTGGGCGTG
CAAGGTTTAG GTGTCTCTGA GATCGCCTAT CAAAATGCAC TTATTTATGC GAAAGGTAGA
ATCCAAGGGC GCGGCTTAAG TGGCGTTAAA GCCCCTGAAA TGGCGGCGGA TCCTATTCTA
GTCCATGGTG ATGTTCGCCG TATGTTGATG TCTCAAAAAG CCTTCAACGA GGGAGCGAGA
GCCATGATGG GTCAGCAAGC GTTATGGCTG GATAAAGCAG AGCGTCATAG CAACCCTGAA
AAGGCCAAGG AGGCCTCTAA GTTAGCCGCA CTGTTTACCC CTATTGTGAA AGGTTTCGTG
ACTGACAGAG GCTTTAATGC CTGTGTCGAT GCTCAACAGG TCTTTGGCGG CCATGGTTAT
ATCCATGAGT GGGGAATGGA GCAGTTTGTA CGTGATATTC GCATCGCCAT GATTTATGAA
GGCACAAATG GCGTACAGGC ACTGGATCTG GTTGGCCGTA AGATACTGTC AGATAAGGGG
GCTGCGCTGA TGAGTTGGTC TGGGCTGGTT AAACAGTTTA TCGGTGAGAA CATGGGTAAT
GATCAGATGA AGCCCTACAT TGCCGGCTTG ATGGATGCCT CTGGTGATCT CGAGAAAGCC
ACTCAGTTTA TCGCAACTAA TGCAGAGAAG AACCCAGACA TTCTTGGCGC TGCTTCAATG
CCATATATGC AGATATTAGG GATCACAGCT TTAGCTTGGA TGTGGGCACG TATCGCTTCA
ACGGCAATCT TAGCACTCGA GAATGGCACT ACCGAGATTG AGTTTTACCA AGGCAAGCTA
AAAACCGCCA CATTTTACAT GAACTATTGG GCGGTACAAA CCAGAAGCTT ACGTAAACAG
ATAGAAGCGA GCAGCGAACA GTTAACTCAA TTTAGTGAGG CTGATTTTTA A
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| Protein sequence | MPTYQAPLRD YQFVLNELLN IYEESELQGF DEIDADLGDA ILQGVADFAT EIMLPLNSSG
DVEGCKLLDG HVIAPKGFKE AYQQYVDNGW GTLTCDPEFG GQGLPEVIGV FATEMKTATN
MAFAMYPGLT HGAYAAIHAH GSDALKQKYL EKLVTGEWTG TMNLTESHAG TDLALLRTKA
VDAGEGFFAI SGEKIFISSG DHDLAENIIH LVLARLPDAP AGVKGISLFA VPKYLVNDDG
SIGDANKLCA TGLEHKMGIH GNSTCVMNFD GALGELVGEP HQGLRAMFTM MNQARLGVGV
QGLGVSEIAY QNALIYAKGR IQGRGLSGVK APEMAADPIL VHGDVRRMLM SQKAFNEGAR
AMMGQQALWL DKAERHSNPE KAKEASKLAA LFTPIVKGFV TDRGFNACVD AQQVFGGHGY
IHEWGMEQFV RDIRIAMIYE GTNGVQALDL VGRKILSDKG AALMSWSGLV KQFIGENMGN
DQMKPYIAGL MDASGDLEKA TQFIATNAEK NPDILGAASM PYMQILGITA LAWMWARIAS
TAILALENGT TEIEFYQGKL KTATFYMNYW AVQTRSLRKQ IEASSEQLTQ FSEADF
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