| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0105 |
|---|
| Symbol | |
|---|
| ID | 4058702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 98248 |
|---|
| End bp | 100086 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641229102 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_603577 |
|---|
| Protein GI | 94984213 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGT ACAAAGCCCC CCTGCGCGAC ATCAAGTTCC TGATGCACGA GTTGCTGGAC
GCCCCCCGGG TCCTGGCCGG TCTGCCCTTC TACGCCCAGA ACGAGACGGC CGATGCCGAC
CTGATGAACC AGGTGCTGGA AGAGGGCGCC CGCTTTGTCG AGACCGAGCT GGTACCGCTG
AATCAGATCG GGGATCAGGA AGGCTGCACG CGGCATGAGG ACGGCAGTGT GACCACGCCC
ACCGGCTTCA AGGCGGCCTA CGAGAAGTAC CGCCAGGCGG GTTGGACTGC TCTGGATGCC
GACCCGGCCT ACGGCGGTCA GGGGATGCCG CACCTCGTCA GCACGGTCAT GAGCGAGATG
ATCACCAGCG CCAATGTGGC CTGGGGCATG TATCCTGGCC TCTCACACGG CGCATACTCG
GCGCTGTCCG CGGTGGGCAG CGAGGAGCTG AAGAACCTCT ACCTACCCAA GCTCGTCAGC
GGCGAATGGA CCGGGACGAT GTGCCTCACC GAGCCGCACG CGGGGACGGA CCTGGGGATC
ATTCGGACAA AGGCCACCGA CAACGGCGAC GGCACCTACG CCATCACCGG CACCAAGATC
TTCATCAGCG CCGGTGAGCA CGACCTGGCG GAGAACATTC TTCACCTCGT CCTGGCCCGC
CTGGAAGGCA GCCCCATGGG AACGAAGGGG ATCTCGCTCT TCCTGGTGCC CAAGTTCATT
CCCAACGCGG ACGGCACGCT CGGTGAGCGC AACGCCGTGG TATGCGGCTC GCTCGAGCAC
AAGATGGGGA TCCACGGCAA CGCGACCGCC GTGCTGAACT TCGACGGCGC GAAGGGCTAC
CTGGTCGGCG AGATCAACAA GGGCATGAAC CACATGTTCA TCATGATGAA CGCTGCCCGC
CTGGGAACCG GCCTCCAGGG CCTCGGCCTG GGGGAGGTGG CGTACCAGAA TGCCCTGGCC
TACGCCAAGG AACGCCTGCA GATGCGCCAC GAGCCGCGGG TGAAGCCGAG TGAACCCGCC
GACCCGATTA TCGTTCATCC CGATGTGCGC CGGATGCTGC TGACCGGCAA GGCGTACACC
GAGGCGGGCC GTGCCCTGGC GATGTGGCTG GCCCTCAACA TCGACCTCGA ACACCACCAC
CCCGACGAGG CGGGGCGCCA GGAGGCGGCA GACCTGGTCG CGCTGCTGAC GCCGGTCGCC
AAAGCCTTTA TGACCGACAA CGGCTTCCAG ACCGCGGTGC TCTCGCAACA GGTCTTCGGC
GGCCACGGCT ACATCCGCGA GTGGGGCATG GAGCAGTTTG TGCGCGATGC CCGCATCGGC
CAAATCTACG AGGGCACCAA CGGCATCCAG GCGCTTGACC TATTGGGCCG CAAGGTGCTG
ATGGACGGCG GCAAGAAGCT CCAGAAGCTC GCCGGGATGC TCCAGCAGTT TGTGGAGGAG
AACGCGGAGG ATGAGCAGCT CGCGCCCTAC CTCGACCAAC TCAGCAAGGC GGCGAGTCAG
CTCGGCACCC TCACGATGGT GATCGGACAA AAGGCGATGC AGGGACCAGA GGGCGCCGAC
GAGGTGAACG CCGCTGCTGT GGACTACCTG CGCTACTTCG GGCATGTGGT CTATGGCTAC
CTGTGGGCGC GGATGGCCAA GCTTGCGCAG CAGAAGATCG ACGCCGGGCA GGACCGGGAC
GGCTTCTACC TGAGCAAGGT GCAGACTGCC CGGTTCTACT TCAGCAAGCT GTTCCCCGAG
ACCAAGATGC TGGCCGCCAC CATCAAGGCC GGCAACGAGC CGCTCGCGGT GGATGACCGC
GCGGTGTTTG GGCTGGAACA GAATCTGGTT GAGGCCTAG
|
|---|
| Protein sequence | MPQYKAPLRD IKFLMHELLD APRVLAGLPF YAQNETADAD LMNQVLEEGA RFVETELVPL
NQIGDQEGCT RHEDGSVTTP TGFKAAYEKY RQAGWTALDA DPAYGGQGMP HLVSTVMSEM
ITSANVAWGM YPGLSHGAYS ALSAVGSEEL KNLYLPKLVS GEWTGTMCLT EPHAGTDLGI
IRTKATDNGD GTYAITGTKI FISAGEHDLA ENILHLVLAR LEGSPMGTKG ISLFLVPKFI
PNADGTLGER NAVVCGSLEH KMGIHGNATA VLNFDGAKGY LVGEINKGMN HMFIMMNAAR
LGTGLQGLGL GEVAYQNALA YAKERLQMRH EPRVKPSEPA DPIIVHPDVR RMLLTGKAYT
EAGRALAMWL ALNIDLEHHH PDEAGRQEAA DLVALLTPVA KAFMTDNGFQ TAVLSQQVFG
GHGYIREWGM EQFVRDARIG QIYEGTNGIQ ALDLLGRKVL MDGGKKLQKL AGMLQQFVEE
NAEDEQLAPY LDQLSKAASQ LGTLTMVIGQ KAMQGPEGAD EVNAAAVDYL RYFGHVVYGY
LWARMAKLAQ QKIDAGQDRD GFYLSKVQTA RFYFSKLFPE TKMLAATIKA GNEPLAVDDR
AVFGLEQNLV EA
|
|---|
| |