| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2696 |
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| Symbol | |
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| ID | 5611784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3257943 |
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| End bp | 3259733 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640933615 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001474431 |
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| Protein GI | 157375831 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAT ATCAAGCCCC ACTTCGTGAC TACCAGTTTG TATTAAATGA ACTTCTTAAT
ATCTATGAGC GTACAGAGCT CAAAGGTTTC GATGAAATTG ATGTCGAACT TGCCGATGCT
ATCTTGCAAG GTGTAGCCGA CTTCTCAACT GAAATTATGC TACCACTCAA CAGCAGTGGT
GATGTTGAAG GTTGCAAACT GGTCGATGGT AATGTCATTG CCCCTAAAGG ATTTAAAGAA
GCGTACCAAC AATATGTCGA TAATGGTTGG GGCACCTTGA CCTGTGATCC TGAATATGGC
GGTCAAGGTT TACCCGAGGC CATCGGGGTA TTTGCGACCG AGATGAAAAC CGCGACTAAC
ATGGCCTTTG CCATGTATCC CGGACTCACC CATGGTGCCT ATGCGGCAAT TCATGCCCAT
GGCAGTGATG CACTTAAACA GAAATACTTA GAGAAGCTGG TGACTGGTGA ATGGACGGGT
ACCATGAACC TGACTGAGTC TCATGCCGGA ACCGATCTCG CTTTGCTACG CACTAAAGCA
ATCGAGGCTG GAGAGGGTCA ATATGCGATC TCCGGCGAGA AGATATTTAT CTCATCGGGC
GATCATGATC TGGCCGAAAA CATTGCCCAT CTGGTGCTGG CCCGATTACC CGATGCGCCG
GCGGGTGTGA AGGGGATCTC TCTGTTTGTC GTGCCTAAGT TTTTAATCAA TGAAGATGGC
AGTCTGGGTG ATGCCAATAC TCTGTGTGCC ACCGGACTCG AGCACAAGAT GGGTATTCAT
GGTAACTCAA CCTGCGTGAT GAACTTCGAT GGTGCCCTCG GTGAGTTGGT GGGTGATCCG
CATCAAGGTC TAAGGGCGAT GTTCACCATG ATGAACCAGG CGAGACTCGG CGTTGGGGTT
CAAGGACTGG GCGTGTCAGA GATCGCATAC CAAAATGCAC TCGCCTATGC CAAAGACAGA
ATTCAGGGAC GGGGACTCAG TGGCGTTAAA GCGCCGGAGA TGGCGGCGGA TCCTATCTTA
GTTCATGGTG ATGTAAGGCG TATGTTGATG TCGCAAAAAT CCTTCAATGA AGGGGCGAGA
GCGATGATAG GTCAACAGGC GCTATGGCTC GATGAGGCCG AGCGTCACAG CGATCCGGAA
AAAGCCAAAA TGGCAAATAA GTTGGCCGCG TTATTTACAC CGATAGTCAA AGGGTTTGTA
ACCGATAGAG GCTTCAATGC CTGTGTCGAT GCCCAGCAGG TATTTGGTGG TCATGGTTAC
ATTCACGAGT GGGGCATGGA GCAATTTGTA CGTGATATTC GTATCTCTAT GCTCTATGAA
GGCACTAATG GCGTACAGGC GCTGGATCTT GTCGGTCGAA AGATATTGTC CGACAAGGCT
GCAACCTTGA TGAGCTGGTC GGCTCTTGTG AAACAGCTTA TCGAAGAGAA CATGAGCAAT
GACGCAATGA AGCCCTATCT TGCCGGTTTG ATGGATGCGT CAAAGGATCT GGAAAAATCC
ACGCAATATG TCGCCATGAA TGCGCCGAAG AATTCGGATA TTCTGGGGGC TGCATCTATG
CCCTATATGC AAATTTTGGG GATCACAGCA TTAGCCTGGA TGTGGACTCG CACGGCGTCG
ATAGCACTAG CGGCGCTGGA AACAGATACC GGCGACAGAG AGTTTTATCA GGGCAAACTG
AAAACAGCCC AGTTCTATAT GGGGTATTGG GCGGTACAGA CTCGCAGTTT GCGTAAGCAG
ATAGAGTCGA GCAGTGAACA ACTGACCGAA CTCGATGAGG CCGATTTTTA G
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| Protein sequence | MPTYQAPLRD YQFVLNELLN IYERTELKGF DEIDVELADA ILQGVADFST EIMLPLNSSG
DVEGCKLVDG NVIAPKGFKE AYQQYVDNGW GTLTCDPEYG GQGLPEAIGV FATEMKTATN
MAFAMYPGLT HGAYAAIHAH GSDALKQKYL EKLVTGEWTG TMNLTESHAG TDLALLRTKA
IEAGEGQYAI SGEKIFISSG DHDLAENIAH LVLARLPDAP AGVKGISLFV VPKFLINEDG
SLGDANTLCA TGLEHKMGIH GNSTCVMNFD GALGELVGDP HQGLRAMFTM MNQARLGVGV
QGLGVSEIAY QNALAYAKDR IQGRGLSGVK APEMAADPIL VHGDVRRMLM SQKSFNEGAR
AMIGQQALWL DEAERHSDPE KAKMANKLAA LFTPIVKGFV TDRGFNACVD AQQVFGGHGY
IHEWGMEQFV RDIRISMLYE GTNGVQALDL VGRKILSDKA ATLMSWSALV KQLIEENMSN
DAMKPYLAGL MDASKDLEKS TQYVAMNAPK NSDILGAASM PYMQILGITA LAWMWTRTAS
IALAALETDT GDREFYQGKL KTAQFYMGYW AVQTRSLRKQ IESSSEQLTE LDEADF
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