| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3477 |
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| Symbol | |
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| ID | 4689687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3688965 |
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| End bp | 3690761 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836491 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_983695 |
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| Protein GI | 121606366 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.865632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGT ACAACCCACC CCTGCGCGAC ATGCAGTTCG TCCTGCACGA AGTGCTCAAG
GTCACCGACG AGCTGCGGGG CTTGCCGCCG CATGCCGACA TCGACGCCGA CACCATCAAT
GCGGTGCTCG AAGAGGGCGG CAAATTCGCC GTTGAAGTCA CCTTTCCGCT CAACATCAGC
GGCGACGAGG AAGGCTGCAC GCTCGACAAG ACCACCCATG AAGTCACGCC GCCCAAGGGT
TTCAAGCAGG CCTACGCGCA GTTTGTCGAA GGCGGCTGGG CGGCGCTGAG CTGCGACCCG
GAGTACGGTG GCCAGGGCCT GCCCTTCGTC GTCAACCAGT GCTTCTACGA GATGATGAAC
TCGGCCAACC AGGCCTGGAC CATGTACCCC GGCCTGTCGC ACGGCGCCTA CGAGGCGCTG
CATGCGCACG GCACCGACGC GCAGAAAAAG CTCTACCTGC CAAAATTAGT CAGCGGCGAA
TGGACCGGCA CCATGTGCCT GACTGAGCCG CATTGCGGCA CCGACCTCGG GATGCTGCGC
ACCAAGGCCG AACCGCAGGC CGACGGCACG TTCAAGCTGA CCGGCAACAA GATTTTCATC
AGCGCCGGCG AGCACGACAT GACGTCCAAC ATCCTGCACC TGGTGCTGGC CCGGCTGCCG
GATGCGCCGC AGGGCAGCAA GGGCATCAGC CTGTTCATCG TTCCCAAGTT CAACGTCAAT
GAAGACGGCT CCATCGGTTC GCGCAACGGC ATTTACTGCG GCGGCCTGGA GCACAAGATG
GGCATCCACG GCAACGCGAC GGCGCAAATC GTGCTGGAAG ACGCCGTCGG CACGATGGTC
GGCGCGCCCA ACAAGGGCCT GGCCGCGATG TTCGTGATGA TGAACGCCGC CCGACTGGGC
GTGGGCAACC AGTCGCTGGG CCTGACCGAA GTGGCCTACC AGAATGCGCT GGCCTATGCC
AAGGACCGCA TCCAGATGCG TTCGCTCTCG GGCGTCAAGG CGAAAGACAA GCCGGCCGAC
CCGATCATCG TGCATCCCGA CGTGCGCAAG ATGCTGCTGA CCGCCAAGGC TTATGCCGAA
GGCGGCCGGG CGCTGGCGAT TTACTGCACC TTGCTGCTCG ACAAGGAGCT TTACCACCCG
GATGAAAAGG TGCGCAAGGA CTCGGGCGAG ATCGTCGCGC TGCTCACGCC CATCGTCAAG
GCCTTCCTGA CCGACAACGG CCACATCGCC ACCAACGCCT GCATGCAGGT GTTCGGCGGC
CACGGCTACG TCAAGGAATG GGGCATGGAG CAGCTGGTGC GCGACAACCG CATCAACATG
ATCTACGAAG GCACCAACAC CATCCAGTCG CTTGACCTGC TGGGCCGCAA GATTCTGGGC
AACAACGGCG CGACGCTGAA GAAGTTTGGC AAATTGATTG GCGCGCTGAT TGCCGAGGAA
GGCGTGAACG AGAAGATGGC CGAGTTCATC AACCCGCTGG CCTATCTGGC CGACCAGATG
ACCAAGTTCA CCACCGAACT GGGCTTCAAG GGTTTCCAGA ACCCGGATGA AGTGGGCGCG
GCGGCGGTCG ATTATTTGCG CGTGGCCGGC CACCTGGTGT TTGGCTACTT CTGGGCGCGC
ATGGCGCAAA CCGCGCTGCG CGAAATCGCT GCTGGCAATC CCGACCCGTT CTACCTCGGC
AAGGTGCAGA CGGCGCGCTT CTACTTCGCC AAGCTGTTCC CCGAGACCGC CACCTTGATG
CGCACCGCGC GCAGCGGCAG CCGGGCGCTG ATGGACACCG ACGCCGCGCT GGCTTGA
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| Protein sequence | MPQYNPPLRD MQFVLHEVLK VTDELRGLPP HADIDADTIN AVLEEGGKFA VEVTFPLNIS
GDEEGCTLDK TTHEVTPPKG FKQAYAQFVE GGWAALSCDP EYGGQGLPFV VNQCFYEMMN
SANQAWTMYP GLSHGAYEAL HAHGTDAQKK LYLPKLVSGE WTGTMCLTEP HCGTDLGMLR
TKAEPQADGT FKLTGNKIFI SAGEHDMTSN ILHLVLARLP DAPQGSKGIS LFIVPKFNVN
EDGSIGSRNG IYCGGLEHKM GIHGNATAQI VLEDAVGTMV GAPNKGLAAM FVMMNAARLG
VGNQSLGLTE VAYQNALAYA KDRIQMRSLS GVKAKDKPAD PIIVHPDVRK MLLTAKAYAE
GGRALAIYCT LLLDKELYHP DEKVRKDSGE IVALLTPIVK AFLTDNGHIA TNACMQVFGG
HGYVKEWGME QLVRDNRINM IYEGTNTIQS LDLLGRKILG NNGATLKKFG KLIGALIAEE
GVNEKMAEFI NPLAYLADQM TKFTTELGFK GFQNPDEVGA AAVDYLRVAG HLVFGYFWAR
MAQTALREIA AGNPDPFYLG KVQTARFYFA KLFPETATLM RTARSGSRAL MDTDAALA
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