| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1754 |
|---|
| Symbol | |
|---|
| ID | 6200409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1984824 |
|---|
| End bp | 1986608 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641705745 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001832873 |
|---|
| Protein GI | 182678727 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0420795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCT ACAAGGCTCC ATTGCGCGAT ATGCGCTTTG TCATTTTCGA ACTCATGGAT
TGCGGCGACA TTACCACTTT GCCTGGCTAT GAGGAAGCAA CGCCTGATCT CATCGATTCT
GTTCTAGAGG AAGCGGCGCG CTTCTGCGAG CAAGTGCTTT TCCCTCTGAA TCGTTCTGGT
GATGAGGAAG GATGCGTTTT TGATAGCGGC GTGGTGCGGA CCCCAAAGGG GTTTCAGGAA
GCCTACAAGG CTTTCTGTGA AGCTGGTTGG CCAGGTATCA CCTCTTCACC CGCTTATGGT
GGGCAAGGGC TGCCCAAGAT CGTGAATAGT CTGATCGAGG AAATGATCTG TTCCTCCAAC
CTCTCTTTCG GTCTTTACCC CGGCCTCAGC CATGGCGCCT GTGTCGCCTT GGAGAGCCAT
GGTTCGGAAG AGCTCAAGGA TAAATATCTG CCGAAACTTG TGGAAGGCAC GTGGTCCGGC
ACGATGTGCT TGACCGAGCC CCATTGCGGC ACTGATCTCG GCCTGTCCCG CACGAAGGCG
GTGCCCGCGG AGGATGGCAC TTACAGAATT ACTGGTACCA AAATCTTCAT CTCGGCCGGC
GAACATGATT TAACGGAAAA TATCCTTCAT CTCGTCCTGG CGCGCCTTCC CGATGCGCCT
AAAGGGATTA AGGGCATCAG CCTTTTCCTC GTACCCAAAT TTTTTGTTCA TGATGACAAC
ACGCTTGGGG CACGTAACGG CGTCTCATGC GGCTCGATCG AACATAAGAT GGGTATCAAA
GCTTCAGCCA CTTGCGTCAT CAATTTCGAT GAAGCAACGG GCTGGCTGGT CGGTGAGCCG
CACAAGGGCA TGCGTGCCAT GTTCACGATG ATGAACACGG AACGCCTGGC TGTTGGTCTG
CAAGGCCTTG GGATCGCCGA AGTTTCGTAT CAGGGCGCTG TCGCTTATGC CCGTGAACGT
TTACAAGGCC GTTCCCTGAC CGGGGCAAAA TATCCCGATA AGCCGGCCGA TCCCATCATC
GTTCATCCCG ATATTCGCCG CATGTTGTTG ACGCAGCGGG CTTATGCCGA AGGATGCCGT
GCTTTCGGCA TATGGGCGGC AAAGCATTTG GATCTCCGCA ATCATCCTGA TGCGACCGTG
CGACAGGAAG CCGAAGAATT CGTCGCACTG GTGACGCCTG TCGTCAAAGC CTTGTTCACG
GATCTTGGCT CGGAAGCAGC CAATCTCGGT ATGCAAGTGT TTGGCGGTCA CGGCTACATT
CGCGAGCATG GCATGGAGCA ATATGCACGC GACGTCCGTA TTGCCCAGAT TTATGAAGGG
ACCAATGGCG TTCAGGCTCT TGATTTCGTC GGCCGCAAGC TGCCCGCGGA TATGGGGCGT
TTGTTGCGCC GTTTCTTCCA TCCCGTAGCC GCCTATATCG AGGAAAAATC TTCCGAAACG
ACACTGACGG AGTTTATCGA TCCCCTCAAT AAGGCGTTTA CGCGCTTGCA ACAGGCAACG
ATCAAGATTG CTCAAGCAGG GCTACGCAAT CCTGATGAAG CAGGCGCGGC CGCCACGGAT
TATCTCCGTT TATTTGGCCT CACAGCCTTG GCCTACCTTT GGGCGCGTAT GGCTGAAGTG
AGCCTGCCGA AGATCGGTGC CGATGATACC GATGGATTTT ACGTCGCCAA GGTCGGGACG
GCACGTTTCT TCATGCAGCG CCTGCTGCCG CAAACAGGTG CGCTGTTTTC TTCCATCATG
GCTGGCAGCA AATCAACGAT GGCTTTCGAC GAGGCTGCGT TTTGA
|
|---|
| Protein sequence | MASYKAPLRD MRFVIFELMD CGDITTLPGY EEATPDLIDS VLEEAARFCE QVLFPLNRSG
DEEGCVFDSG VVRTPKGFQE AYKAFCEAGW PGITSSPAYG GQGLPKIVNS LIEEMICSSN
LSFGLYPGLS HGACVALESH GSEELKDKYL PKLVEGTWSG TMCLTEPHCG TDLGLSRTKA
VPAEDGTYRI TGTKIFISAG EHDLTENILH LVLARLPDAP KGIKGISLFL VPKFFVHDDN
TLGARNGVSC GSIEHKMGIK ASATCVINFD EATGWLVGEP HKGMRAMFTM MNTERLAVGL
QGLGIAEVSY QGAVAYARER LQGRSLTGAK YPDKPADPII VHPDIRRMLL TQRAYAEGCR
AFGIWAAKHL DLRNHPDATV RQEAEEFVAL VTPVVKALFT DLGSEAANLG MQVFGGHGYI
REHGMEQYAR DVRIAQIYEG TNGVQALDFV GRKLPADMGR LLRRFFHPVA AYIEEKSSET
TLTEFIDPLN KAFTRLQQAT IKIAQAGLRN PDEAGAAATD YLRLFGLTAL AYLWARMAEV
SLPKIGADDT DGFYVAKVGT ARFFMQRLLP QTGALFSSIM AGSKSTMAFD EAAF
|
|---|
| |