Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0606 |
Symbol | |
ID | 5353692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 624224 |
End bp | 626029 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640809660 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_001346001 |
Protein GI | 152986838 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.941769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATT ACAAGGCCCC CTTGCGTGAT ATCCGTTTCG TTCGCGACGA GCTGCTGGGC TACGAAGCGC ACTACCAGAG CCTGCCGGGC GCCGAAGACG CGACTCCCGA CATGGTCAAC GCCATCCTCG AGGAAGGTGC GAAGTTCTGC GAACAGGTGA TCGCTCCGCT GAACCGCGTC GGCGACCTGG AGGGCTGCAC CTGGAGCGCC GAGGGGGTGA AGACCCCGAG CGGCTTCAAG GAAGCCTACC AGCAGTTCGT CGAAGGCGGC TGGCCGAGCC TGGCCCATGA CGTCGAGCAC GGCGGCCAGG GCCTGCCGGA ATCCCTCGGC CTGGCCATCA GCGAGATGGT CGGCCAGGCC AACTGGTCCT GGGGCATGTA CCCGGGCCTG TCCCATGGCG CCATGAATAC CCTGCACGCC CACGGCACCG CCGAGCAGCA GGCGACCTAC CTGACCAAGC TGGTCTCCGG CGAGTGGACC GGCACCATGT GCCTGACCGA GCCGCACTGC GGCACCGACC TGGGCATGCT GCGCACCAAG GCCGAGCCGC AGGCCGACGG CAGCTACAAG GTCACCGGCA CCAAGATCTT CATCTCCGCC GGTGAGCACG ACATGGCCGA CAACATCGTC CATATCGTCC TGGCCCGCCT GCCCGACGCT CCGCAGGGCA CCAAGGGCAT CTCGCTGTTC ATCGTGCCGA AGTTCCTGCC CAACGCCGAA GGCAACGCCG GCGAGCGCAA CGCGGTTTCC TGCGGCTCCA TCGAGCACAA GATGGGCATC CACGGCAACG CCACCTGCGT GATGAACTTC GACGCCGCCA CCGGCTTCCT GATCGGCCCG CCGAACAAGG GCCTGAACTG CATGTTCACC TTCATGAATA CCGCTCGCCT GGGTACCGCG CTGCAAGGCC TGGCCCATGC CGAAGTCGGT TTCCAGGGCG GCATCGCCTA TGCCCGCGAG CGTCTGCAGA TGCGTTCGCT GACCGGGCCG AAGGCGCCCG AGAAGCCCGC CGACCCGATC ATCGTGCATC CCGACGTGCG CCGCATGCTG CTGACCATGA AGGCCTTCGC CGAAGGCAAC CGCGCGATGC TGTACTTCGC CGCCAAGCAG GTCGACATCG TCCAGCGCAG CCAGGACGAG GAGCAGAAGA AGGCCGCCGA TTCGATGCTG GCCTTCCTCA CCCCGATCGC CAAGGCGTTC ATGACCGAAG TCGGCTTCGA GTCCGCCAAC CACGGCGTGC AGATCTACGG CGGCCACGGG TTCATCGCCG AGCATGGCAT GGAGCAGAAC GTCCGCGACA GCCGCATCTC GATGCTGTAC GAAGGCACCA CCGGCGTTCA GGCCCTCGAC CTGCTGGGGC GCAAGGTGCT GATGACCCAG GGCGAGGCAC TGAAGGGCTT CACCAAGATC GTGCACAAGT TCTGCCAGGC CAACGAAGCC AACGAAGCCG TCAAGGAATT CGTCGCCCCG CTGGCGCAGC TGAACAAGGA GTGGGGCGAC CTGACCATGA AGGTCGGCAT GGCCGCCATG AAGGATCGCG AGGAAGTCGG CGCCGCTTCG GTGGACTACC TGATGTACTC CGGCTACGCC TGCCTGGCCT ACTTCTGGGC CGACATGGCG CGCCTGGCCG CCGAGAAGCT GGCCGCCGGC ACCGGCGAGG AAGCCTTCTA CAAGGCCAAG CTGCAGACCG CGCGCTTCTA CTTCCAGCGC ATCCTGCCGC GTACCCGCGC CCACGTCGCC GCCATGCTGT CCGGCGCCAA CAACCTGATG GAGATGGCCG AGGAAGATTT CGCCCTCGGT TACTGA
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Protein sequence | MPDYKAPLRD IRFVRDELLG YEAHYQSLPG AEDATPDMVN AILEEGAKFC EQVIAPLNRV GDLEGCTWSA EGVKTPSGFK EAYQQFVEGG WPSLAHDVEH GGQGLPESLG LAISEMVGQA NWSWGMYPGL SHGAMNTLHA HGTAEQQATY LTKLVSGEWT GTMCLTEPHC GTDLGMLRTK AEPQADGSYK VTGTKIFISA GEHDMADNIV HIVLARLPDA PQGTKGISLF IVPKFLPNAE GNAGERNAVS CGSIEHKMGI HGNATCVMNF DAATGFLIGP PNKGLNCMFT FMNTARLGTA LQGLAHAEVG FQGGIAYARE RLQMRSLTGP KAPEKPADPI IVHPDVRRML LTMKAFAEGN RAMLYFAAKQ VDIVQRSQDE EQKKAADSML AFLTPIAKAF MTEVGFESAN HGVQIYGGHG FIAEHGMEQN VRDSRISMLY EGTTGVQALD LLGRKVLMTQ GEALKGFTKI VHKFCQANEA NEAVKEFVAP LAQLNKEWGD LTMKVGMAAM KDREEVGAAS VDYLMYSGYA CLAYFWADMA RLAAEKLAAG TGEEAFYKAK LQTARFYFQR ILPRTRAHVA AMLSGANNLM EMAEEDFALG Y
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