Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2039 |
Symbol | |
ID | 4278951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2414717 |
End bp | 2416513 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134828 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_750723 |
Protein GI | 114563210 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAT ATAAAGCCCC CATTCGTGAC GTAAAATTTG TTATGCAAGA GCTGCTAGAT TGTGAAGGGC ACTATCAGCG TTTGGGTTAC CAAGATGCCA GTATCGACAT GGTTGATGCC ATTATTGCTG AAGCGGCAAA ATTAACTGAA CAAGTTGTTG CACCATTAAA TCAAATTGGC GATCAACAAG GTTGTACCTG GAAAGACGGC GTTGTAACCA CACCAGACGG ATTTAAAGAG GCGTACGCAC AATATGTAGA AGGCGGCTGG CCAACGTTAT CTCAGTCTGA AGAGTTTGGT GGCCAAGGTT TACCTCATTC ATTAAATATC AGTATTGCTG AGTTGTTTTC CAGCGCGAAC CACAGCTTTG CTATGTACCC AGGCCTTAGC CATGGCGCAT TAGCCACAAT TGAAGCCCAC GGTACAGAGG CTCAAAAACA GCAGTTTATG CCAAGCCTAG TAGAAGGTAA GTGGACTGGC ACAATGTGTT TAACAGAGCC ACATTGTGGT ACTGACTTAG GCATGTTGCG CACCAAAGCT GAACTGCAAG CTGACGGCAC TTATTCATTG AGTGGCACTA AAATCTTTAT CTCAGCAGGC GAGCATGATC TGTCTGACAA CATTGTGCAT ATTGTTATTG CCCGTATTCC TGGTGCGCCA GAAGGCAACA AAGGTATCTC GCTATTTATC GTACCTAAGT TCAACGTTAA TGAAGATGGC ACAATTTCAG ATAGAAACGG CGTGAGTTGT GGTTCTATTG AACATAAAAT GGGCATTAAT GGTAACGCTA CCTGTGTGAT TAATTTTGAT GGTGCAACTG GGCATTTGAT TGGTGAACCT AATCGCGGCC TTAAGTGCAT GTTTACCTTT ATGAATGCTG CACGTATTGG TGTGGCAAGT GAAGGTGTTG CGGCTGCTGA AGCATCATTC CAGGGGGCAT TAGCCTACGC AAAAGATCGC CTACAAATGC GTTCAATTAG CGGTGTTAAA AACCCTAATG GCCCAGCAGA CCCAATCATT GTTCATCCAG ATGTGCGTAG AATGCTATTG ACCCAAAAGT CGATTGCTGA AGGCGGCCGA GCGTTAATTT CGTATCTTGC CCAGCTAGTT GATATTGGCC ATGCCGAAAA AGACGAAGCC ATTAAAGCTG ATGCTGAAAC TAAGTTAGCC TTGTTAACAC CTATTGCTAA AGCATTTTTA TCCGAGCTTG GTTTTGAATG TACCAGCCAC GGCGTGCAAA TATTCGGTGG CCACGGCTTT ATTAAAGAGT GGGGCATGGA ACAGTTAATG CGCGACACCA AGATTAGCTG CTTATATGAA GGCACTACTG GTATTCAGGC ATTAGACTTA CTGGCTCGTA AAATTATTGG TACTCAGGGT GAAGTATTAA AGCCTTTCTC TAAAGACGTT ACCGTATTCT GCCAACAAAA CATGGACAAC CCAGCCATGG CTGAGTTTAT TAAACCGATT ATGTCTTATG CCAAAGAGTG GCATGAACTG ACCGTGTTAA TTGGCGGCAA AGCGATGAAG AACCCGGATG AAATCGGCGG TGCATCTGTT GATTACTTAA TGTATGCCGG TTATGTGACA CTTGCTTTCT TCTGGGCAAA AATGGCTAAA GTGGCACAAG ACAAATTGGC TGCAGGCACC ACTGAAACTG CGTTTTATGA AGCTAAAATC AAAACCGCTC AATTCTTTAT GCAGCGTATG TTACCAAGAG CCAAAGGCCA TGCGGCATGT ATTGCCAATG GTGTTGATTC AATGATGGCA CTAGATAGCG AAGACTTTGC TTTTTAA
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Protein sequence | MPEYKAPIRD VKFVMQELLD CEGHYQRLGY QDASIDMVDA IIAEAAKLTE QVVAPLNQIG DQQGCTWKDG VVTTPDGFKE AYAQYVEGGW PTLSQSEEFG GQGLPHSLNI SIAELFSSAN HSFAMYPGLS HGALATIEAH GTEAQKQQFM PSLVEGKWTG TMCLTEPHCG TDLGMLRTKA ELQADGTYSL SGTKIFISAG EHDLSDNIVH IVIARIPGAP EGNKGISLFI VPKFNVNEDG TISDRNGVSC GSIEHKMGIN GNATCVINFD GATGHLIGEP NRGLKCMFTF MNAARIGVAS EGVAAAEASF QGALAYAKDR LQMRSISGVK NPNGPADPII VHPDVRRMLL TQKSIAEGGR ALISYLAQLV DIGHAEKDEA IKADAETKLA LLTPIAKAFL SELGFECTSH GVQIFGGHGF IKEWGMEQLM RDTKISCLYE GTTGIQALDL LARKIIGTQG EVLKPFSKDV TVFCQQNMDN PAMAEFIKPI MSYAKEWHEL TVLIGGKAMK NPDEIGGASV DYLMYAGYVT LAFFWAKMAK VAQDKLAAGT TETAFYEAKI KTAQFFMQRM LPRAKGHAAC IANGVDSMMA LDSEDFAF
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