Gene Rmet_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0385 
Symbol 
ID4037172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp410451 
End bp412238 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content64% 
IMG OID637975759 
Productacyl-CoA dehydrogenase-like protein 
Protein accessionYP_582540 
Protein GI94309330 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.13259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGT ACACCGCACC GTTGCGCGAC ATGCAGTTCG TGCTCCATGA ACTGCTCGGC 
GCCGAAGCCG AACTCAAGGC GATGCCGCAG CACGCGGACA TCGACGTGGA CACCATCAAC
CAGGTGCTTG AGGAAGCCGG CAAGTTCTGC TCCGACGTGG TCTTCCCGCT GAACCAGCCT
GGTGACCGTG AAGGCTGCAC CTACGTCGGC GACGGCGTGG TGCGCGCGCC CAAGGGCTTC
AAGGAGGCCT ATCAGCAGTT CGTGGAAGCC GGCTGGCCCG CACTGGCGTG CGATCCGGAG
TTTGGCGGCC AGGGTTTGCC GATCATGATC AACAACGCGC TGTACGAGAT GCTGAACTCG
GCCGGCCAGG CATGGACGAT GTATCCGGGC CTGTCGCACG GTGCCTATGA AGCGCTGCAC
GCGCACGGCA CGCCGGAACT GAAGCAGACG TATCTGCCGA AGCTGGTGTC GGGTGTCTGG
ACGGGCACGA TGTGCCTGAC CGAGCCGCAC TGCGGCACCG ATCTCGGCAT CCTGCGCAGC
AAGGCCGAAC CGCAGGCCGA TGGCTCGTAC TCGATCACCG GCACCAAGAT CTTTATCTCG
GCCGGCGAGC ATGACATGGC CGAGAACATC ATCCACCTCG TGCTGGCACG CCTGCCGGAC
GCACCTGGCG GTACCAAGGG CATTTCGCTG TTCGTCGTGC CGAAGTTCAT CCCCGACGCC
AACGGCAACC CGGGCGAGCG CAACGGCATC AAGTGCGGCT CGATCGAACA CAAGATGGGC
ATTCACGGCA ACGCCACCTG CGTGATGAAC CTCGACGGCG CGCGCGGCTG GATGGTGGGC
GAGCCCAACA AGGGCCTGAA CGCGATGTTC GTGATGATGA ACGCCGCGCG CCTCGGCGTT
GGCGCCCAGG GTCTGGGCTT GACCGAGGTG GCCTATCAGA ACTCGCTGGC CTACGCGAAG
GACCGTCTGC AGATGCGCTC GCTGACTGGC CCGAAGGCAC CGGACAAGCC CGCCGACCCG
ATCATCGTGC ACCCGGACGT GCGTCGCATG TTGCTGACGC AAAAGGCCTA CGCCGAAGGT
GGCCGCGCGT TCGCCTACTG GACCGCGCTG CAGATCGACC GTGAACTGTC GCACCCCGAC
GAAAGCGTGC GCAAGGAAGC CGGCGACCTC GTGGCGCTGC TGACCCCGGT CATCAAGGCC
TTCCTGACCG ACAACGCCTT CACCTCGACC AACGAGGGCA TGCAGGTGTT CGGCGGCCAC
GGCTACATCT CCGAGTGGGG CATGGAGCAA TACGTGCGCG ACGCGCGTAT CAACATGATC
TACGAAGGCA CCAACACGGT TCAGTCGCTG GACCTGCTGG GCCGCAAGGT GCTGGGCGAC
ATGGGCGCCA AGCTGAAGGC CTTCGGCAAG ATCGTGCAGA CGTTTGTCGA GGAAGAAGGC
ACGAGCGAGG CGATGCAGGA GTTCGTCAAC CCGCTGGCCG ACATCGGCGA CAAGGTGCAG
AAGCTGACGA TGGAGATCGG CATGAAGGCG ATGGGCAATG CCGACGAAGT GGGTGCTGCC
GCCGTGCCGT ACTTGCGCGT GGTGGGACAC CTCGTGTTCT CGTACTTCTG GGCCCGCATG
GCCAAGATCG CCCTGGACAA GCAGGATAGC GGCGACAAGT TCTACACGAC CAAGCTGGCC
ACGGCGCGCT TCTACTTCGC CAAGCTGCTG CCGGAAACCG CGGGCGAGAT TCGCAAGGCT
CGCGCTGGCG CATCCACGCT GATGGCGCTG GACGCAGATC TGTTCTGA
 
Protein sequence
MGQYTAPLRD MQFVLHELLG AEAELKAMPQ HADIDVDTIN QVLEEAGKFC SDVVFPLNQP 
GDREGCTYVG DGVVRAPKGF KEAYQQFVEA GWPALACDPE FGGQGLPIMI NNALYEMLNS
AGQAWTMYPG LSHGAYEALH AHGTPELKQT YLPKLVSGVW TGTMCLTEPH CGTDLGILRS
KAEPQADGSY SITGTKIFIS AGEHDMAENI IHLVLARLPD APGGTKGISL FVVPKFIPDA
NGNPGERNGI KCGSIEHKMG IHGNATCVMN LDGARGWMVG EPNKGLNAMF VMMNAARLGV
GAQGLGLTEV AYQNSLAYAK DRLQMRSLTG PKAPDKPADP IIVHPDVRRM LLTQKAYAEG
GRAFAYWTAL QIDRELSHPD ESVRKEAGDL VALLTPVIKA FLTDNAFTST NEGMQVFGGH
GYISEWGMEQ YVRDARINMI YEGTNTVQSL DLLGRKVLGD MGAKLKAFGK IVQTFVEEEG
TSEAMQEFVN PLADIGDKVQ KLTMEIGMKA MGNADEVGAA AVPYLRVVGH LVFSYFWARM
AKIALDKQDS GDKFYTTKLA TARFYFAKLL PETAGEIRKA RAGASTLMAL DADLF