| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1537 |
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| Symbol | |
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| ID | 4082436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1604167 |
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| End bp | 1605969 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009905 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_616583 |
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| Protein GI | 103487022 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.564403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCT ATCGCGCCCC TGTGCAGGAC AGCCTGTTCT TGATCAACGA GGTGCTTGGC
GTTGAGAACT ATGCCAATCT TCCCGGCTTC GCCAACGCGA CCCCCGACAT GATCGAGGCG
GTGCTGACCG AAGCGGGGAA GTTTTGCGAA GAGGTGCTGT TCCCGATCAA CCAGTCGGGC
GACCTTGAAG GCTGCACGCG CCACGACGAC GGGTCGGTGA CGACGCCCAA GGGGTTCAAG
GAAGCGTATA AGGCCTATTG CGAGGCGGGC TGGACGCTGC TGACGCAGCC GGAAGAGTTC
GGTGGACAGG GACTGCCGCA TGTCGTCGGC TTTCCGGTCG AGGAATATCG CATGGCCGCG
AACCAGGCCT TTGCCATGTA TCCGGGGCTG ACGCAGGCCG CCGTTGCGGC AATCCTCGTC
AAGGGATCGG ACGAGCAGAA GGCGCGCTAT GTTCCGAAGA TGGTGTCGGG CGAATGGGGC
GGTACGATGA ACCTGACCGA GCCGCATTGC GGCACCGACC TTGGCCTCAT CCGCACCCGC
GCGGTGCCCA ATGGCGACGG CAGCTATGCC ATCACGGGCA CCAAGATCTT CATTTCGTCG
GGCGAGCACG ACCTGACCGA CAACATCATC CACCTCGTCC TCGCCAAGAC TCCCGACGCG
CCCGACAGTG TGAAGGGCAT CTCGTTGTTC ATCGTGCCGA AGTTCCTCGT GAAGGAAGAT
GGCTCGCTCG GCGAGCGCAA CGCGCTGCAA TGCGGGTCGA TCGAGCACAA GATGGGCATC
CATGCCAATT CGACCTGCGT GATGAACTAT GACGGCGCCA CCGGCTGGAT GGTCGGCGAG
GAGAATAAGG GGCTCGCCGC GATGTTCGTG ATGATGAACG CCGCGCGGCT GGGTGTCGGG
ATTCAGGGAT TGGGGCAGGC CGACATCGCC TTCCAGAATG CCGTCGCCTA TGCGCAGGAC
CGCCGCCAGG GCCGCGCGCT CACCGGACCG AAAGACCCTC AGGAAAAGGC CGACCCGCTG
TTCGTCCATC CCGATGTGCG CCGGATGCTG ATGGACGCCA AGGCGACCGT CGAAGGGCTG
CGCGCGCTGT GCCTGTGGGG CGCGCTCCAG GTCGATCTGG CGCATGTGGC CGAGACCGAG
GAGGAACGGC AGCTCGCCGA CGATCTCGTC AGCCTGCTCA CCCCGGTCAT CAAGGGCTAT
GGCACCGACA AGGGCTATGA GGTCGCGACC AATGCGCAGC AGGTGTTCGG CGGCCACGGT
TACATCGAGG AACATGGCAT GAGCCAATAT GTCCGCGATG CCCGCATCAC GATGATTTAC
GAAGGCGCGA ACGGCGTGCA GGCGATGGAC CTTGTCGGCC GCAAGCTCGC GCAGAATGGC
GGCCGCGCGA TCCAGACCCT CTTCGCCATC GTCGATGCCG AATGCGCCGC GGCGAAGGAC
AAGCCCGCGC TCGCCGATTT CGCGGGGCGC CTCGAAAAAG CCAATGGCGA GCTGAAGGCC
GCGACGATGT GGTTCATGGC TAATGGCATG ACCAACCCGA ACAATGTCGG CGCCGGCGCG
CATCATTATA TGCACATCAC CGGCATCGTC GCGCTGGGGC TGATGTGGCT GCGCATGGCC
GAGGCGGCGC AGAAGGCGCT CGACGAAGGG CGCGGAGCCA AGGATTTCCT CGATGCAAAG
ATCGTCACCG CGCGCCACTT CGGCGAACGC TTCCTGCCCG ACGCGGGATC GCTTCGCCGC
AAGATCGAGG CGGGCAGCGA GACGATGATG GCGCTGACCC CGGAACAGTT TTTCGCGGCC
TGA
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| Protein sequence | MPVYRAPVQD SLFLINEVLG VENYANLPGF ANATPDMIEA VLTEAGKFCE EVLFPINQSG
DLEGCTRHDD GSVTTPKGFK EAYKAYCEAG WTLLTQPEEF GGQGLPHVVG FPVEEYRMAA
NQAFAMYPGL TQAAVAAILV KGSDEQKARY VPKMVSGEWG GTMNLTEPHC GTDLGLIRTR
AVPNGDGSYA ITGTKIFISS GEHDLTDNII HLVLAKTPDA PDSVKGISLF IVPKFLVKED
GSLGERNALQ CGSIEHKMGI HANSTCVMNY DGATGWMVGE ENKGLAAMFV MMNAARLGVG
IQGLGQADIA FQNAVAYAQD RRQGRALTGP KDPQEKADPL FVHPDVRRML MDAKATVEGL
RALCLWGALQ VDLAHVAETE EERQLADDLV SLLTPVIKGY GTDKGYEVAT NAQQVFGGHG
YIEEHGMSQY VRDARITMIY EGANGVQAMD LVGRKLAQNG GRAIQTLFAI VDAECAAAKD
KPALADFAGR LEKANGELKA ATMWFMANGM TNPNNVGAGA HHYMHITGIV ALGLMWLRMA
EAAQKALDEG RGAKDFLDAK IVTARHFGER FLPDAGSLRR KIEAGSETMM ALTPEQFFAA
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