| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0396 |
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| Symbol | |
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| ID | 5194014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 458861 |
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| End bp | 460639 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584842 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001265753 |
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| Protein GI | 148545651 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.352257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT ATAAAGCGCC CCTGCGCGAC ATGCGCTTCG TACTGAATGA AGTCTTCAAC
GTGGCCGAGC AGTGGACGCA GTTGCCCGGG CTGGCCGAGG TTGTCGATGC CGACACGGCC
ATGGCCGTGC TGGAAGAAGC CGGCAAGGTC ACCGCCAAGA CCATTGCGCC GCTCAGCCGC
GCCGCCGACG AAGAGGGCTG CCACTGGGAC AACGGCGCGG TGCGGACCCC AGCCGGTTTC
ATTGAAGCCT ACAACACCTA CGCCGAAGGC GGCTGGGTGG GCGTGGGCGG CGACCCGCTG
TTCGGCGGTA TGGGCATGCC CAAGGCCATC TCGGCCCAGG TCGAGGAAAT GGTCAACGCG
TCCAGCCTGG CTTTCGGCCT GTACCCGATG CTGACGGCCG GCGCCTGTCT GTCGATCAAC
GCCCACGCCA GCGAGGCCTT GAAGGAAAAA TACCTTCCGA ACATGTATGC CGGCGTTTGG
GCCGGCTCCA TGTGCCTGAC CGAGCCGCAT GCCGGTACTG ACCTGGGCAT CATCCGCACC
AAGGCCGAGC CCCAGGCTGA TGGCAGCTAC AAGGTCAGCG GTACCAAGAT TTTCATCACG
GGTGGCGAAC ACGACCTGAC CGAGAACATC ATCCATCTGG TGCTGGCCAA GTTGCCGGAT
GCACCGGCGG GGCCGAAAGG TATTTCGCTG TTCTTGGTGC CGAAATTCCT GGTCAATGAA
GACGGTAGCC TCGGCGCGCG GAACCCGGCC ACTTGCGGCT CGATCGAGCA CAAAATGGGC
ATCCAGGCCT CGGCTACCTG TGTGATGAAC TTCGACGAAG CTGTCGGCTA CATCGTCGGT
GAGCCGAACA AAGGCCTGGC GGCCATGTTC ACCATGATGA ACTACGAGCG CCTGGGCGTT
GGCATTCAAG GCCTGGCGTC GGCCGAGCGC TCCTACCAGA ACGCCGTGGA GTACGCCCGC
GATCGCCTGC AAAGCCGTGC CCCGGCCGGC CCACAAGCCA AGGACAAGGC TGCCGACCCG
ATCATCGTCC ACCCGGACGT GCGTCGCATG CTGTTGACCA TGAAGGCGCT GATCGAAGGT
GGCCGCGCAT TCTCCACTTA TGTGGCCATG CAACTGGACA GTGCCAAGTA CAGCGAAGAC
GCCAGCGTGC GCAAACGCAG CGAAGAGCTG GTGGCACTGC TGACGCCGGT GGCGAAGGCC
TTCCTCACCG ACCTGGGCCT GGAGTGCGCA GTGCACGGCC AGCAGGTATT TGGCGGGCAT
GGTTACATTC GTGAGTGGGG GCAGGAGCAG TTGGTGCGCG ACGTGCGCAT TACCCAGATC
TACGAAGGTA CCAATGGCAT CCAGGCCCTC GACCTGATGG GGCGTAAAGT GGTGGCCAGC
GGCGGGGCAT ACTACAAGCT GTTCTCTGAC GAAATTCGCC AGTTCATTAC CGGTGCAGGC
AGCGAACTGG ACGAATTCGC CAAGCCACTG GGCGCTTCGC TCGACCAGCT CGACGGGTTG
ACCGAGTGGG TATTGCAACA GGCCAAGGGC AACCCGAATG AAATTGGCGC GGCTTCGGTC
GAGTACCTGC ATGCCTTTGG CTATGTTGCC TATGGCTACA TGTGGGCACT GATGGCGCGG
GCGGCCCAGG CGGGCGAGGG GGATGCGCCG TTCTATTCGG GCAAGCTGGG TACGGCGCGG
TTCTACTTTG CGCGGTTGCT GCCACGGGTG GATTCGCTGG TGGCTTCGGT GAAGGCGGGA
AGTGAGTCGC TGTACCTGCT GGATGCCGAG CAGTTCTGA
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| Protein sequence | MADYKAPLRD MRFVLNEVFN VAEQWTQLPG LAEVVDADTA MAVLEEAGKV TAKTIAPLSR
AADEEGCHWD NGAVRTPAGF IEAYNTYAEG GWVGVGGDPL FGGMGMPKAI SAQVEEMVNA
SSLAFGLYPM LTAGACLSIN AHASEALKEK YLPNMYAGVW AGSMCLTEPH AGTDLGIIRT
KAEPQADGSY KVSGTKIFIT GGEHDLTENI IHLVLAKLPD APAGPKGISL FLVPKFLVNE
DGSLGARNPA TCGSIEHKMG IQASATCVMN FDEAVGYIVG EPNKGLAAMF TMMNYERLGV
GIQGLASAER SYQNAVEYAR DRLQSRAPAG PQAKDKAADP IIVHPDVRRM LLTMKALIEG
GRAFSTYVAM QLDSAKYSED ASVRKRSEEL VALLTPVAKA FLTDLGLECA VHGQQVFGGH
GYIREWGQEQ LVRDVRITQI YEGTNGIQAL DLMGRKVVAS GGAYYKLFSD EIRQFITGAG
SELDEFAKPL GASLDQLDGL TEWVLQQAKG NPNEIGAASV EYLHAFGYVA YGYMWALMAR
AAQAGEGDAP FYSGKLGTAR FYFARLLPRV DSLVASVKAG SESLYLLDAE QF
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