| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0962 |
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| Symbol | |
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| ID | 6182871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 836050 |
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| End bp | 837837 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671583 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001797763 |
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| Protein GI | 171463650 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAT ACAACCCCCC TCTACGTGAT ATTCAATTTG TCATTCATGA ATTGCTTGAT
GCAGGAAAAG AGTTTTCAGC CTTACCCGCT TATCAAGAGG TAGACAAAGA CACCATTAAT
CAAATTATTG AAGAGGCAGG CAAATTTGCC AGTGAGATTG CCTTTCCTTT AAATCAAATC
GGTGATAAAG AAGGCTGTAC ACGTAGTGAT GATGGCTCTG TTACGACCCC TGCAGGCTTT
AAACAAGCTT ATGAGCAGTA TGTCGCTGGA GGTTGGCCTG CTTTATCTTG TGACCCAGCA
TATGGTGGTC AAGGATTGCC GCAACTACTA AATACCGTTC TTTATGAGAC CCTCAACTCT
GCCAATCAAT CATGGACGAT GTATCCAGGC CTATCACATG GCGCTTATGA ATGTTTGCAT
GCCCATGGCA CTAATGAGCA GAAAAAAACT TATCTAGAGA AATTGGTTTC CGGTCAATGG
ACTGGAACCA TGTGCTTGAC TGAGCCTCAT TGCGGCACTG ATCTTGGCCT ATTAAAAACT
AAGGCGGAAC TGCAAGCGGA TGACACCTAT GCAATCACTG GAACAAAGAT TTTTATTTCG
AGTGGCGACC ATGATCTTGC AGAGAATATT GTTCACCTCG TACTCGCAAG ATTGCCTGAC
TCTCCTATTG GCAGTAAAGG CATCTCTTTA TTTGCGGTAC CAAAGTTTCA AGTGGGAGCA
GATGGCTCGG TTGGTAAATC AAATGCTGTT TCTTGCGGCT CACTCGAACA CAAGATGGGC
ATTCATGGCA ATGCAACGTG TGTAATGAAC TTTGATGGCG CAATTGGCAC TTTAGTTGGC
GAGCCTCACA AAGGTTTGAA TGCAATATTC GTTATGATGA ATGCCGCTCG CCTTGGGGTG
GGCATGCAGA GCTTAGGATT AACTGAGGTG GCTTATCAAA ACTCTGCTGC TTATGCTAAA
GAGCGTTTGC AGATGCGCAG CTTAACTGGA GCTAAAGCCC CTGAGAAAGC GGCTGATCCA
ATCATCGTTC ATCCGGATGT ACGTAGAATG CTACTCACAC AAAGAGCTTA TGCTGAAGCT
GGCAGAGCGT TTTCCTACTG GGTAGCACTC ATGATTGATA CCGAACTCAA TCATCCTGAT
GAAGGTGTTC GCAAAGAAAC TGGCGAAATG GTCACCCTAC TTACTCCAAT TATTAAAGCC
TTTTTAACAG ATAACGCTTT TGTGGCCACG AATGAAGGTA TGCAGGTATT TGGTGGGCAC
GGTTATATTG CCGAATGGGG CATGGAGCAA TATGTTCGTG ATGCCCGCAT CAACATGATT
TATGAAGGCA CCAATACGAT TCAATCGCTA GACCTCTTAG GTCGCAAGGT GCTGGGTGAT
ATGGGTAAAA AACTCACTAA ATTTGGCAAG ATCATCGAGA AATTTATTGA TGATGAAGGC
GTTCGTAAAG AAATGCAGGA GTTCATTGAC CCTCTTGCTG ATATTGCTGT AAAAGTAGAA
AAACTTACCA AAGAAATCGG CATGAAGGCG ATGATGAATC ACGAAGAAGT CGGTGCCGCC
GCGGTTCCCT TTCTACGGGT TGTCGGTCAC CTAATCTATT CCTACCTTTT TGCCCGCATG
GCCAAAATTG CGTTAGCGAA TAAATCAAGC AATGACCCTT TCTATCAAGC AAAATTGGCA
ACCGCTCGCT TTTATTTTGA CAAGTTGTTG CCAGAGACGG CCATGCTCAT TCGTCAAGCG
CGTGCTGGCT CCAAATCTTT AATGGCAATG CCTGCTGACT TTTTCTGA
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| Protein sequence | MPQYNPPLRD IQFVIHELLD AGKEFSALPA YQEVDKDTIN QIIEEAGKFA SEIAFPLNQI
GDKEGCTRSD DGSVTTPAGF KQAYEQYVAG GWPALSCDPA YGGQGLPQLL NTVLYETLNS
ANQSWTMYPG LSHGAYECLH AHGTNEQKKT YLEKLVSGQW TGTMCLTEPH CGTDLGLLKT
KAELQADDTY AITGTKIFIS SGDHDLAENI VHLVLARLPD SPIGSKGISL FAVPKFQVGA
DGSVGKSNAV SCGSLEHKMG IHGNATCVMN FDGAIGTLVG EPHKGLNAIF VMMNAARLGV
GMQSLGLTEV AYQNSAAYAK ERLQMRSLTG AKAPEKAADP IIVHPDVRRM LLTQRAYAEA
GRAFSYWVAL MIDTELNHPD EGVRKETGEM VTLLTPIIKA FLTDNAFVAT NEGMQVFGGH
GYIAEWGMEQ YVRDARINMI YEGTNTIQSL DLLGRKVLGD MGKKLTKFGK IIEKFIDDEG
VRKEMQEFID PLADIAVKVE KLTKEIGMKA MMNHEEVGAA AVPFLRVVGH LIYSYLFARM
AKIALANKSS NDPFYQAKLA TARFYFDKLL PETAMLIRQA RAGSKSLMAM PADFF
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