| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3554 |
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| Symbol | |
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| ID | 1046234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4030335 |
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| End bp | 4032104 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146969 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | NP_745691 |
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| Protein GI | 26990266 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.244117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTT ATTCCGCCCC CCTGCGCGAC ATGCGCTTCG TCCTGCATGA CGTGTTCAAC
GCTTCGGGCC TGTGGGCCCG ACTGCCCGCC CTGGCCGAAC GCATCGATGC CGATACTGCC
GACGCCATTC TCGAGGAAGC ATCCAAAGTC ACCGGCCAGC TGATCGCCCC GCTCAGCCGC
AACGGTGACG AGCAAGGTGT GTGCTTCGAC GCAGGCCAAG TCACCACCCC CGAGGGCTTT
CGCGAGGCCT GGAACACCTA CCGCGAAGGC GGCTGGGTCG GCTTGGGCGG CAACCCGGAG
TACGGCGGCA TGGGCATGCC AAAGATGCTC GGCGTGCTGT TCGAAGAGAT GCTCTACGCG
GCTGACTGCA GCTTCAGCCT GTATTCGGCA TTGAGCGCAG GCAGCTGCCT GGCGATCGAT
GCCCACGCCA GCGAAGCGCT CAAGGCCACT TACCTGCCAC CGCTGTACGA AGGCCGCTGG
GCCGGCACCA TGTGCCTGAC CGAACCCCAT GCCGGCACTG ACCTGGGGCT GATCCGCACC
CGCGCCGAGC CTCAGGCCGA TGGCAGCGTG CGCATCAGTG GCAGCAAGAT CTTCATTACC
GGCGGCGAGC AGGACCTGAC CGAGAACATC GTCCACCTGG TGCTGGCCAA AATGCCGGAT
GCGCCCGCCG GTGCCAAAGG CATATCGCTG TTCCTGGTGC CCAAATTCCT GGTCGAGGCC
GACGGCCGTC TGGGCGCGCG TAACGCTGTC CATTGTGGCT CGATCGAACA CAAGATGGGC
ATCAAGGCCT CGGCGACCTG TGTCATGAAC TTTGACGGTG CCATCGGTTA CCTGGTGGGC
GAGCCGAACA AGGGCCTAAC AGCGATGTTC ACCATGATGA ACTACGAGCG CCTTTCCATC
GGCATACAGG GCATCGGTTG TGCCGAAGCC TCCTACCAGA GCGCCGCCCG ATATGCCAAC
GAGCGCCTGC AGAGCCGCGC AGCGACTGGC CCGCAGGCAC ACGACAAGGC GGCCGACCCG
ATCATCCACC ATGGTGATGT TCGGCGCATG CTGCTGACCA TGCGCACCCT CACCGAAGCA
GGTCGGGCGT TCGCCGTCTA CGTTGGCCAG CAACTGGACG TGGCACGCTA TGCCGAAGAC
GCTGGCGAGC GCGAGCATGC CCAGCGCCTG GTGGCACTGC TGACACCGGT GGCCAAGGCA
TTCTTCACTG ATAACGGCCT GGAAAGCTGC GTGCTTGGCC AGCAGGTGTA TGGCGGTCAT
GGCTACATCC GCGAATGGGG CCAGGAGCAA CGGGTGCGGG ACGTGCGCAT TGCACAGATC
TATGAGGGCA CCAACGGCAT CCAGGCCCTT GATCTGCTGG GGCGCAAGGT GTTGGCTGAC
GGTGGCCAGG CGTTGGCCAG CTTTGCCAGC GAAGTGCGCG CCTTCAGTGT AGATGCGCCC
TTGCACCGCG AGGCCCTGCA GGCGAGCCTG GCGCGGCTGG AGGCCACCAG CAGCTGGTTG
CGGGCGCAGG CTGGCGAGGA TGCCAACCTG GTGAGCGCGG TAGCGGTTGA GTACCTGCAG
CTGTTCGGGC TGACGGCCTA TGCGTACATG TGGGCGCGGA TGGCGGCGGT GGCGCTAGCC
AAACGTGATG AGGACGACGC GTTTCATGGC GCGAAGCTTG CCTGTGCGGC GTTCTATTTC
CAGCGGGTCT TGCCGCGGGG GTTGGGGCTG GAGGCGAGCA TTCGGGCCGG TAGTGGCAGC
CTTTATGGGC TAGAGGCCAC ACAGTTCTGA
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| Protein sequence | MTTYSAPLRD MRFVLHDVFN ASGLWARLPA LAERIDADTA DAILEEASKV TGQLIAPLSR
NGDEQGVCFD AGQVTTPEGF REAWNTYREG GWVGLGGNPE YGGMGMPKML GVLFEEMLYA
ADCSFSLYSA LSAGSCLAID AHASEALKAT YLPPLYEGRW AGTMCLTEPH AGTDLGLIRT
RAEPQADGSV RISGSKIFIT GGEQDLTENI VHLVLAKMPD APAGAKGISL FLVPKFLVEA
DGRLGARNAV HCGSIEHKMG IKASATCVMN FDGAIGYLVG EPNKGLTAMF TMMNYERLSI
GIQGIGCAEA SYQSAARYAN ERLQSRAATG PQAHDKAADP IIHHGDVRRM LLTMRTLTEA
GRAFAVYVGQ QLDVARYAED AGEREHAQRL VALLTPVAKA FFTDNGLESC VLGQQVYGGH
GYIREWGQEQ RVRDVRIAQI YEGTNGIQAL DLLGRKVLAD GGQALASFAS EVRAFSVDAP
LHREALQASL ARLEATSSWL RAQAGEDANL VSAVAVEYLQ LFGLTAYAYM WARMAAVALA
KRDEDDAFHG AKLACAAFYF QRVLPRGLGL EASIRAGSGS LYGLEATQF
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