| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1469 |
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| Symbol | |
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| ID | 5197024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1619576 |
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| End bp | 1621291 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581017 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001261971 |
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| Protein GI | 148554389 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.16092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACGC CCCCTCTCGA TGAACAGCGC TTCGTGCTCG AACATGTCAC GCGTCTGGCC
GAGTTGGGCG CGACCGATCG TTTCGCGGCG GCGACACCCG ACCTGGTCGC CGCGGTGATC
GAGGGGGTGG GGAGCTTCGC CGAGGGCGAA TGGGCGCCGT TGGCGCGCGT CAGCGATCAG
GTCGGCGCGA AGTGGACGCC CGAGGGCGTG GTCATGCCGG AGGGCTTCGC CGCCGCCTAC
AAGGCCTATG TCGAGGCGGG CTGGGGCACG ATCAGCGCGC CCGAGGCCCA TGGCGGGCAG
GGGCTGCCCT ATGCGCTGGC GTCGGTGGTG CTGGAGACGC TCGGCACCGC CAACATGGCC
TTCACCCTCT GCCCGCTGCT GTCGGTCGGC GCGATCGAGG CGCTGGTCCA TCACGGGTCG
GAGGCGCAGC AGGCGCTCTA CCTGCCCAAG CTGGTCAGCG GCGAATGGAC CGGCACGATG
AACCTGACCG AGCCACAGGC CGGATCGGAC GTCGGCGCGC TGCGCGCGAA GGCGACCCCG
CGCGGCGACG GGACCTGGTC GATCAGCGGC ACCAAGATCT TCATCTCGTT CGGCGACCAC
GACCTGGCCG ACAACATCGT CCACCTCGTC CTCGTCCGCA CCCCCGACGG CCCGGCCGGT
ACCAAGGGCA TCTCGCTGTT CCTCGTTCCC AAATATCGGG TGAACCCCGA CGGATCGCCC
GGCGCGGAGA ACGACGTCCG CACCGTGTCG ATCGAGCACA AGATGGGGTT GCACGGGTCG
CCGACCTGCG TCCTCTCCTT CGGCGACCGT GGCGAGTGCG TCGGCGAGTT GATCGGGCCC
GAGTTCGGCG GGATGCGCGC GATGTTCACG ATGATGAACA ACGCCCGCCT CAACGTCGGC
CTGCAGGGTG TCCAGGCGGC CGAGGCCGCG ACCCAGAAGG CAGTCGCCTA TGCGCGCGAG
CGCATCCAGT CGGCGCGCGC CGGATCGGGC AGCCCGGCGC CGGTCGCGAT CATCGAGCAT
CCCGACGTCC GCCGCATGCT GCTGCGGATG AAGGCGCTGA CCCAGGCGGC CCGCGCGCTG
CTCTATTATT CGGCCGGCAT GGTCGACCGC GCGACCCTGG GCGACAAGGC GGCGCAGGCC
CGGCTCGAAC TGCTGACCCC GCTCGCCAAG GCCTATGGCA CCGATCTCGG CTGCGAGGTC
GCGAATCTCG GCATCCAGGT CCATGGCGGC ATGGGCTATA TCGAGGAGAC CGGCGCCGCC
CAGTTCTTCC GCGATGTCCG CATCACCACG ATCTACGAGG GCACCAACGG CATCCAGGCC
GCCGACCTCG TCGGCCGCAA GCTCGGCCTC GAAGGCGGCG GGACGCTCGC CCGGCTGATC
GCCGACATGC GCGCCGAGGC CGAGGATGCG GGCCTGCGCG CCCTGATCGA CGCCTGCGAG
CGGGTCGCCG CGCATCTGGC GGCGGCGGAC GTCGACGACC GGCTGGCGGC GAGCTATCCC
TTCCTCACCA TGCTCTCGAC CGCCGTCGCC GGCTGGCTGA TGGAACGGCA GGGCCGGATC
GCCGCGAACG GCGACGGCGC CTTCCTGGCG ATGAAGCGGA CCGCCGCGCG CTTCTATGTC
GAGCAGGTGG TGCCCGAGGC GATGGGCCTG ATCGCCGCGG CGATGGCGCC CGCCGACATC
CTCTATGCGG TCGGGCCCGA CGAATTCGCC GCCTGA
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| Protein sequence | MFTPPLDEQR FVLEHVTRLA ELGATDRFAA ATPDLVAAVI EGVGSFAEGE WAPLARVSDQ
VGAKWTPEGV VMPEGFAAAY KAYVEAGWGT ISAPEAHGGQ GLPYALASVV LETLGTANMA
FTLCPLLSVG AIEALVHHGS EAQQALYLPK LVSGEWTGTM NLTEPQAGSD VGALRAKATP
RGDGTWSISG TKIFISFGDH DLADNIVHLV LVRTPDGPAG TKGISLFLVP KYRVNPDGSP
GAENDVRTVS IEHKMGLHGS PTCVLSFGDR GECVGELIGP EFGGMRAMFT MMNNARLNVG
LQGVQAAEAA TQKAVAYARE RIQSARAGSG SPAPVAIIEH PDVRRMLLRM KALTQAARAL
LYYSAGMVDR ATLGDKAAQA RLELLTPLAK AYGTDLGCEV ANLGIQVHGG MGYIEETGAA
QFFRDVRITT IYEGTNGIQA ADLVGRKLGL EGGGTLARLI ADMRAEAEDA GLRALIDACE
RVAAHLAAAD VDDRLAASYP FLTMLSTAVA GWLMERQGRI AANGDGAFLA MKRTAARFYV
EQVVPEAMGL IAAAMAPADI LYAVGPDEFA A
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