| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2268 |
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| Symbol | |
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| ID | 3960823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2486132 |
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| End bp | 2487913 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917089 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_523521 |
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| Protein GI | 89901050 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.411151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACC AAGCCCCCCT CCAAGATATG TTGTTTGCGA TGCAGGAACT CGCTGGCTTG
TCCAGCGTCA GTGCCCTGCC GGGTTTTGAG GACTACGACC TCGATACCGC CCAGGCCGTC
ATGCAAGAGT CTGCCAAGTT CTGCGCAGGC GTGGTTGCAC CCTTGAACGT CGGCGGCGAC
AAAGATCCGA GTTCCTTCAA AGACGGCGCT GTCACGACCG CGCCTGGATT CAAGGAAGCC
TACGCTCAGT TTACGCAGGG TGGATGGCAA GGCGTGATTC ACCCGACCGA GTTTGGGGGC
CAGGGTTTTC CCAAACTGAT AGCCACGCCC TGCATCGAGA TGCTGCACGC GGCCAGCCTG
TCGTTTGCCC TGTGTCCGAT GCTCACCGAC GGTGCCATTG AGGCACTGCT GGTGGCCGGC
AGCGATGAAC TCAAACGCAA GTTTGTCGGC AAGCTCATCA GCGGCCAGTG GACCGGCACC
ATGAACCTGA CCGAGCCGCA GGCCGGCTCC GACCTGGCAG CGGTGCGCTC CACCGCTCAG
CCGCAGGCGG ACGGCAGTTA CAAGGTGTTC GGCACCAAGA TCTTTATCAC CTACGGTGAA
CACGATATGG CTGAAAACAT CATCCATCTG GTGCTGGCCC GGGTGCCCGG GGCGCCCGAG
GGTGTGAAGG GCATATCGCT GTTTCTGGTG CCCAAGCTGA TGGTTGGCGA CGATGGTGCC
CTGGGCGCGC GCAATGATGT TGCATGTGTG TCGATTGAGC ACAAACTCGG GATCAAGGCG
AGCCCGACGG CGGTATTGCA GTTTGGCGAC CAAGGTGGTG CGGTGGGCTA TGTTGTGGGT
CAGGAAAACC GTGGCCTAGA GTACATGTTC ATCATGATGA ATGCGGCCCG CTTTGCGGTG
GGCATGCAGG GTATTGCGGT TGCCGATCGT GCCTATCAAA AGGCCGTTCG CTTCGCCCAT
GATCGTGCCC AAAGCCGCGA TCTGGCCGGC TCTGACGGCC CGGTCTCGAT CATCAATCAC
CCCGATGTCA AGCGCATGCT GCTGACCATG CGTGCCCACG TCGAGGGCAC GCGAGCCCTG
GCCTACGTGG CGGCTGCCGC CAGCGATGCC GCTCACCACG CCGCTGACGA GCTCACCCGC
AAAAACAACC AAGCCGTTTA TGAATACCTA GTGCCCGTGG TCAAAGGTTT CGCCACTGAA
ATGTCGGTCG AGATGACGAG CCTGGGCGTA CAAGTTCATG GCGGCATGGG CTACATCGAA
GAGACGGGTG CCGCCCAACA CTTCCGCGAC GCCCGCATTC TGACCATCTA CGAAGGCACC
ACCGCCATCC AGGCCAACGA CATCGTGGGC CGAAAAACCC TGCGCGACAA GGGTGCCGTG
GCCAAGGCCC TGTGCGCCCA GATCGCCCTC ACCGAACAGG ACCTGTCCGC GCGCGGCAAC
GACGACTGCA TGGCGATGCT GAACGCGCTC AAGCAAGGCC GGCTGGCCAT GGAAGATGCC
GTTGAGTTCA TCGTTGCGAA TGGCAAGAGC CAGCCCAAGA CTGTGTACGC CGGTGCCGTG
AACTACCTCA AATTGGTAGG CGTTGTCTTG TGCGGCTGGC AAATGGCCCG GGCCATGCTG
GTGGCCCAGG ATAAATTGGA AAGCGACCCC GCGTTCTTCG TCGCCAAGCT GATCACGGCA
CGCTTTTATG CTGAATCTGT GCTGACCCAG GCCACCGGCT TGGCGCAAAG CATCTGCTTG
GGCGGGAACA CAACCAACCG AATGGCGATT GAGCTGTTTT GA
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| Protein sequence | MNYQAPLQDM LFAMQELAGL SSVSALPGFE DYDLDTAQAV MQESAKFCAG VVAPLNVGGD
KDPSSFKDGA VTTAPGFKEA YAQFTQGGWQ GVIHPTEFGG QGFPKLIATP CIEMLHAASL
SFALCPMLTD GAIEALLVAG SDELKRKFVG KLISGQWTGT MNLTEPQAGS DLAAVRSTAQ
PQADGSYKVF GTKIFITYGE HDMAENIIHL VLARVPGAPE GVKGISLFLV PKLMVGDDGA
LGARNDVACV SIEHKLGIKA SPTAVLQFGD QGGAVGYVVG QENRGLEYMF IMMNAARFAV
GMQGIAVADR AYQKAVRFAH DRAQSRDLAG SDGPVSIINH PDVKRMLLTM RAHVEGTRAL
AYVAAAASDA AHHAADELTR KNNQAVYEYL VPVVKGFATE MSVEMTSLGV QVHGGMGYIE
ETGAAQHFRD ARILTIYEGT TAIQANDIVG RKTLRDKGAV AKALCAQIAL TEQDLSARGN
DDCMAMLNAL KQGRLAMEDA VEFIVANGKS QPKTVYAGAV NYLKLVGVVL CGWQMARAML
VAQDKLESDP AFFVAKLITA RFYAESVLTQ ATGLAQSICL GGNTTNRMAI ELF
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