| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1028 |
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| Symbol | |
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| ID | 6408683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1092033 |
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| End bp | 1093814 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710942 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990060 |
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| Protein GI | 192289455 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATC GCGCTCCGAT CGACGACATC CTTCTTTCCC TGAACCACGG TGCGGGATTG
CAGGCCGCCG TCGCCGCCGG CCATTTTGGC GACTACGACA GCGAGATCAC CGCGCAAGTT
CTGGACGAGG CGGGCAAATT CGCCAGCGAC ATCCTGGCGC CGCTGAACCG GGTCGGTGAC
AAGCACGGCA TCAAGCTGGA GCATGGCAAG GTCACCACCG CGCCGGGCTG GCCGGACGCC
TATCAGCGCT GGATCGCGGC CGGCTGGAAT GCGGTGTCGG GACCGGAGGA TTTCGGCGGC
CAGGGCCTGC CGATGGCGGT CAACGCAGCC TGCACCGAGA TCTGGGCGTC GTCCAACATG
GCGTTCGGGC TGTGCCCGCT GCTCACCCTG TCGGCGATCG ACGCGCTGCA CACCCACGGC
AGCGACGCGC TGAAGCAGGT CTATCTCGGC AAGCTGATCT CCGGTGAGTG GACCGGCACG
ATGCAGCTCA CCGAGCCGCA GGCCGGCTCC GACGTCGGCG CGCTGCGCAC CCGCGCCGAG
CGGGCCGCCG ACGGCAGCTA CAGGATCTTC GGCAGCAAGA TCTTCATCAC CTACGGCGAC
CACGACATGA CCGACAACAT CGTGCATTTC GTGCTCGCGC GGCTACCGGA TGCGCCGGCC
GGCACCAAGG GCATCTCGCT GTTCCTGGTG CCGAAATTCC TCGTCAACGC CGACGGCACG
CTGGGCGCCC GCAACGACAT CTATCCGAGC GGGGTCGAGC ACAAGCTCGG CATCCACGCC
TCGCCGACCT GCACCATGAC GATGGGCGAC CACGGCGGCG CAATCGGCTA TCTGATCGGC
GAAGAAAACC GCGGCATGCA GTGCATGTTC ACGATGATGA ACCAGGCCCG GCTCGCGGTC
GGCCTCGAAG GCGTCGGCAT TGCCGATCGC GCCTATCAGC AGGCGCTGGC CTATGCGCAG
GAGCGCAAGC AGGGCCGCGC GGTCGGCAGC GCCGGCCCTG GCTCAGATCC GATCATCAAG
CACCCCGACG TCAAGCGCAC GCTGCTGACG ATGCGGGCGC TGATCGGCGC CGCACGCACG
ATCTGTTACT CGACCGCGGT GGCGCTCGAC ATCGCGGCGC GCAGCACCGA CCCGAAGGTC
AAAGCCTCCG CCACGGCGCG CGGCGCGTTG CTGACGCCGA TCGCCAAAGC GTTCTCCACC
GACATCGGCA TCGAAGTCGC CTCGCTCGGC GTCCAGATCC ATGGCGGCAT GGGCTTCATC
GAAGAGACCG GCGCCGCGCA GCACTACCGC GACGCGCGGA TTGCGCCGAT CTATGAAGGC
ACCAACGGCA TCCAGGCGAT CGACCTCGTC ACCCGCAAGC TGGGCGCTAA CGGCGGCGCC
TCGGTGTTCG CGCTACTCGA CGAGCTGACG CTGATCGTCA AGGATGTGGA AGCATCGAAC
GATCCGGGCT TCGGCCTCAC CGGCCTGCGG CTGCGCGAGG GGCTGGAAGC GCTCGAACGC
ACCAGCCGTT ATCTCCTGGA CAAGCTCGGC AGCGCCACCA ACGACGCGCT GGCCGGCGCC
ACTCCCTACC TGCGTCTGTT CGGCGCCACG CTCGGCGGCT GCGCGCTGGC GGCCGAAGCG
CTCGCGGCGC GCGATCTCGA AGGCATCAAC GATCCGTCGC GCTACGTCGC GCTGGCACGG
TTCTTCGCCG AGACCGTCGC GGTGCAGGCC CCTGCGCTGG AGCGCAGCGT GGTCGACAGC
GCGGCGTCTG TGGCCGGTGC CGAGGCGGTG CTCACTGCCT AA
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| Protein sequence | MTYRAPIDDI LLSLNHGAGL QAAVAAGHFG DYDSEITAQV LDEAGKFASD ILAPLNRVGD
KHGIKLEHGK VTTAPGWPDA YQRWIAAGWN AVSGPEDFGG QGLPMAVNAA CTEIWASSNM
AFGLCPLLTL SAIDALHTHG SDALKQVYLG KLISGEWTGT MQLTEPQAGS DVGALRTRAE
RAADGSYRIF GSKIFITYGD HDMTDNIVHF VLARLPDAPA GTKGISLFLV PKFLVNADGT
LGARNDIYPS GVEHKLGIHA SPTCTMTMGD HGGAIGYLIG EENRGMQCMF TMMNQARLAV
GLEGVGIADR AYQQALAYAQ ERKQGRAVGS AGPGSDPIIK HPDVKRTLLT MRALIGAART
ICYSTAVALD IAARSTDPKV KASATARGAL LTPIAKAFST DIGIEVASLG VQIHGGMGFI
EETGAAQHYR DARIAPIYEG TNGIQAIDLV TRKLGANGGA SVFALLDELT LIVKDVEASN
DPGFGLTGLR LREGLEALER TSRYLLDKLG SATNDALAGA TPYLRLFGAT LGGCALAAEA
LAARDLEGIN DPSRYVALAR FFAETVAVQA PALERSVVDS AASVAGAEAV LTA
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