| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1770 |
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| Symbol | |
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| ID | 4082082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1865963 |
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| End bp | 1867705 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010145 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_616816 |
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| Protein GI | 103487255 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.270198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACA CGCCGCCCAC CGCCGAACAG CTCTTCGTCC TCAATCATAT CGCGCGCATC
GACGCCATGG CGCAGCACGA TCGTTTCGCC GCCGCAACCC CCGACATGGT CGAGGCGATC
GTCGCCGGCA TCGGTGAGTT TGCGGCGGAG GTCTATGCGC CCCTCAACCG CGTCGGCGAC
ACGCAGCCTC CCAAATGGGA CAATGGCAAA GTCACGATGC CGCCGGGCTT CAAGGAGGCG
TATAAGGCGT TCGTCGAGGC GGGCTGGGGC AGCATCGACG GCCCCGGCGA CTATGGCGGA
CAGGACCTGC CCTTCACCCT CGCGACCGTG GTGATCGAGG CGCTGGGCAG CGCGAACATG
GGCTTTTCGC TGTGCAGCAT CCTGACCCCC GGCGCGATCC ACGCGCTGAT GGCCTATGGC
ACCGAGGAAC AGCGGCAGAC CTGGCTCCCC AAGCTGATCA CCGGCGAATG GAACGGCACG
ATGAACCTGA CCGAGCCCGC CGCGGGCAGC GACGTCGGCG CGCTGCGCTC GACCGCCGAA
AAGGTCACCG AGGGCGAGCA CGCGGGCCTT TACCGGATCA AGGGCCAGAA AATCTTCATC
ACCTTCGGCG AGCATGACCT CACCGACAAT ATCGTTCACC TCGTCCTCGC GCGGACACCG
GGCGCGCCCG AGGGCACGCG CGGCATCTCG CTCTTTCTCG TCCCCAAATA CCGCCTCGAC
GCCGACGGCA ATCCGACGAT CTCCAACGGC GTCCATTGCG CGTCGATCGA GCACAAGCTC
GGCATTCACG GCTCACCGAC CGCGGTGATG GTCTATGGCG AGGATGAGGA TTGCCTGGGC
GAGATTGTCG GCGAGGAAAT GGGCGGGATG CGCGCGATGT TCGTGATGAT GAACAATGCG
CGGCTGATGA TCGGCTGCCA GGGCATCCAG ATCGGCGAGC GCGCGATGCA GCAGGCACAG
CGCTTCGCCG CCGAGCGCGT CCAGTCGGCG CTCGCGGGAT CGCCCGACCG CACGCCCGTC
ACCATCGACA AGCACCCCGA CGTCAAGCGG ATGCTCTGGC GGATGCGCGC GCAGACCGAG
GCGGCGCGCG CGCTCGTCTA TTATGCCGCG GCGCAGACCG ACTTCGGCAA ATTGGGTGAC
GAGGCGGCGG CAAGCCGCGC CGACGTGCTG ATCCCGCTCG CCAAGGCGCA CGCGACCGAC
ATCGGCTGTG AAGTCGCGAG CCTCGGCATC CAGGTCCATG GCGGCATGGG TTTCATCGAG
GAAACCGGCG CCGCGCAGCA TTATCGCGAC GCGCGCATCG CGCCGATCTA TGAAGGCACC
AACGGCATCC AGGCCGCCGA TCTCGTCGGA CGCAAGCTCG GCATGGCGGG CGGCGACCTC
GTCCGCGCGC TCATCGACGA TATCGCGCGC GGCGCCGCCG ATTTCCCCGA ATTGCAGCAG
TTGGTGGAGG CCTGCCGCAC AGTCACCGAC TGGATGGTCG GCGCGAACAC CGCCGACCGG
CTCGCGGGCA GCTACCCCTA TCTCACCATG CTCGCGACCG CGACGTGCGG CTGGCTGATG
GCGATCCAGC ACCGGGCGGC GCGCACCGCG CTGGCCGAAG GCAGCGGCGA CCGCGCCTTC
CTGAACGCCA AGCTCACCTC GACGCGCTTT TACCTTGCGC AGATCGTCCC CGCGGCAACC
GGACTCGCAC GCTCGGCGCT GGCGGGCGAC GCCGCGCTGG CAGCGCTGCC GCCGATCGGC
TGA
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| Protein sequence | MTYTPPTAEQ LFVLNHIARI DAMAQHDRFA AATPDMVEAI VAGIGEFAAE VYAPLNRVGD
TQPPKWDNGK VTMPPGFKEA YKAFVEAGWG SIDGPGDYGG QDLPFTLATV VIEALGSANM
GFSLCSILTP GAIHALMAYG TEEQRQTWLP KLITGEWNGT MNLTEPAAGS DVGALRSTAE
KVTEGEHAGL YRIKGQKIFI TFGEHDLTDN IVHLVLARTP GAPEGTRGIS LFLVPKYRLD
ADGNPTISNG VHCASIEHKL GIHGSPTAVM VYGEDEDCLG EIVGEEMGGM RAMFVMMNNA
RLMIGCQGIQ IGERAMQQAQ RFAAERVQSA LAGSPDRTPV TIDKHPDVKR MLWRMRAQTE
AARALVYYAA AQTDFGKLGD EAAASRADVL IPLAKAHATD IGCEVASLGI QVHGGMGFIE
ETGAAQHYRD ARIAPIYEGT NGIQAADLVG RKLGMAGGDL VRALIDDIAR GAADFPELQQ
LVEACRTVTD WMVGANTADR LAGSYPYLTM LATATCGWLM AIQHRAARTA LAEGSGDRAF
LNAKLTSTRF YLAQIVPAAT GLARSALAGD AALAALPPIG
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