| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0435 |
|---|
| Symbol | |
|---|
| ID | 3834001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 509313 |
|---|
| End bp | 511082 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637824519 |
|---|
| Product | Acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_425527 |
|---|
| Protein GI | 83591775 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCT ACCGTGCGCC GATTGCCGAC ATCATGCTGG CGCTGCGCGC CACCGGCCTT
GCCGAAGTCC TCACCCTGCC CGGGGCCGAG GACGTTTGCG AGGATCTGGT CGAGGCCGTG
CTGTCCGAGG CGGGAAAGTT GGCAGCCGAT GTTCTGGCGC CGCTCAACGC CCCGGGCGAC
CGTCAGGGCA GCCGCCTTGA AAACGGCACC GTCCGCACCC CCGACGGCTT CGCCGAGGCC
TATGGCCATT TCGTTGACGG CGGATGGACG GGCGTTCCCT TCGATCCCGA GTATGGCGGC
CAGGGACTGC CCTGGATGGT GGGAACGGCC CTGAACGAGA TCTGGCAGGC CGCCAACATG
TCTTTCGGCC TCGCCCCCCT GCTGAGCGCC GGAGCCATCG AATTGCTCGA CAGCCATGGC
TCGGCCGAGC AGAAGGCCCA GTGGTTGCCC AAGCTGATCA GCGGCGAATG GACGGGCACG
ATGAACCTGA CCGAACCCCA GGCCGGTTCC GATCTGGCGG CGGTGCGGAC CAAGGCGGTC
GCCGCCCCCG ATCTGGGCGA TGGGGTCTAC AGGATCTTCG GGTCGAAGAT CTTCATCACC
TATGGCGACC ACGACTTGGC CCCCAACATC GTCCACATGG TGCTGGCCCG CATCAGCGAC
GCCCCCCCCG GCATCAAGGG CATCTCGTTG TTCATCGTGC CCAAGACCCT GCCCACCGCC
GAGGGCGGGC TGGGCGCGGC CAACGACCTG CGCTGTGTCT CGCTTGAAGA CAAGCTGGGC
ATCCATGCCA GCCCAACCTG CGTGATGGCC TTTGGCGACC AGGGTGGCGC CGTGGGCTAT
CTGGTGGGCG CGGCCAATCA CGGCATCGAA TATATGTTCA CGATGATGAA CAACGCCCGG
CTGGGCGTCG GCGTGCAAGG CGTCGGTCAA GCCGAACGCG CCACCCAGGC GGCGGTCGAA
TACGCCCGCG CCCGGGTGCA GGGTGGTGAC GCCTCGGTGC GCGGCGGTCC GTCCGTCAGC
ATCATCCACC ACCCCGATGT GCGGCGCATG CTGATGACCA TGCGCGCCCG CACCCAGGCC
GCCCGGCTGA TCACCTATCT GACCGCGGCC GCCCTGGATA CGGCCAAGCG CCATGCCGAC
GCCGCCCTTC GCGCCGAAGC CGCGACGCGG GCGGCGCTGC TGACCCCGAT CGCCAAGGCC
TGGAGCACCG AGGCCGGCAT CGACGTGGCC AATCTGGGGA TCCAGGTCCA TGGCGGTCAG
GGCTATATCG AAGACGCCGG CGCCGCCCAG TTCCTGCGCG ACGCCCGCAT CGCCTCGATC
TACGAGGGGA CCAACGGCAT CCAGGCGATT GATCTGGTCG GCCGCAAGGT GCTGCGCGAC
GGCGGCGTGG CCGCCCGCGC CCTAGCAAGC GAGCTTGCCG CCATCGCCGA GCGCTCGGCC
GCGACCCTGC CCGGCTTGCA AGCCCCGCTG GCGGACGGAC TCGCCGATCT GGAGGCCGCC
CTGGAGTGGG TTCTTAGCCA TCCCGACGCC GTGTCCGCCC AGGCGGCCGC CACGCCGTTC
CTGACCCTGT TCGGTCTGGT TCTCGGCGGC GGCCTGCTGG TCGAGCAGGC CGTGATCGCC
ACCGCCGAGG CCGAGAAAGC GGCCGCCGCC ACCACCGCCG GCTTCTTCCT GCGCCACCTG
TTGCCGGCCA CCGCCGGGCA TCTGGCGACG ATCCGCGCCG GGGCGGCCGA TCTGGTCGCT
TTGCACGAGG ACGCTTTCGT CGCGGCCTGA
|
|---|
| Protein sequence | MPSYRAPIAD IMLALRATGL AEVLTLPGAE DVCEDLVEAV LSEAGKLAAD VLAPLNAPGD
RQGSRLENGT VRTPDGFAEA YGHFVDGGWT GVPFDPEYGG QGLPWMVGTA LNEIWQAANM
SFGLAPLLSA GAIELLDSHG SAEQKAQWLP KLISGEWTGT MNLTEPQAGS DLAAVRTKAV
AAPDLGDGVY RIFGSKIFIT YGDHDLAPNI VHMVLARISD APPGIKGISL FIVPKTLPTA
EGGLGAANDL RCVSLEDKLG IHASPTCVMA FGDQGGAVGY LVGAANHGIE YMFTMMNNAR
LGVGVQGVGQ AERATQAAVE YARARVQGGD ASVRGGPSVS IIHHPDVRRM LMTMRARTQA
ARLITYLTAA ALDTAKRHAD AALRAEAATR AALLTPIAKA WSTEAGIDVA NLGIQVHGGQ
GYIEDAGAAQ FLRDARIASI YEGTNGIQAI DLVGRKVLRD GGVAARALAS ELAAIAERSA
ATLPGLQAPL ADGLADLEAA LEWVLSHPDA VSAQAAATPF LTLFGLVLGG GLLVEQAVIA
TAEAEKAAAA TTAGFFLRHL LPATAGHLAT IRAGAADLVA LHEDAFVAA
|
|---|
| |