| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1156 |
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| Symbol | |
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| ID | 3969513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1258399 |
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| End bp | 1260246 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924266 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_531038 |
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| Protein GI | 90422668 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.291998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGGCGG GCCGGTTTCG TGGGAAGACG GCGGCCTGCG CCAACCGACC AAGAAGCGAG
ACCCGCATGA CCTACCGCGC CCCGATCAAC GACATGCTGC TGGCCCTCAA TCACGGCGCG
GGGCTGAACG CCGCCGTGAT CGCCGGGCAT TATGGCGACT ACGACAGCGA AATCACCGCG
GCGGTGCTGG AAGAGGCCGG ACGGTTCGCC TCCGACGTGC TGGCGCCGCT CAACCGGGTC
GGCGACGAGC ACGGCATCAA GCTGCAGCAT GGCAAGGTGA CCACCGCGCC GGGCTGGCCC
GACGCCTATC AGCGCTGGAT CGCGGCGGGC TGGAACGCGG TGTCGGGCGA CGAGGCGTTC
GGCGGCCAGG GCCTGCCGCT GGCGCTCAAC GCCGCCTGCA CCGAGATCTG GGCGGCCTCC
AACGTCGCCT TCGGGCTGTG CCCACTGTTG ACGCTGTCGG CGATCGAGGC GCTCGACGCC
CACGGCAGCG ACGCCTTGAA GAAGATCTAC CTGGAGAAGC TGGTGTCCGG CGAATGGCCC
GGCACCATGC AGCTCACCGA GCCGCAGGCC GGCTCCGACG TCGGCGCGCT ACGCAGCCGT
GCCGAGCGCT ACGGCGACGG CAGCTACCGC ATCATCGGCA GCAAGATCTT CATCACCTAT
GGCGACCACG ACATGACCGA CAACATCGTG CATTTCGTGC TCGCGCGATT GCCCGACGCC
CCGCCCGGCA CCAAGGGCAT CTCGCTGTTT CTGATTCCGA AATTTTTGGT CAACGCCGAC
GGCTCGCTCG GCGAGCGCAA CGACATCTAT CCGACCGGCA TCGAGCACAA GCTCGGCATG
CACGCCGCCC CCACCTGCAC CATGACGATC GGCGATCACG GCGGCGCCGT CGGCTATCTG
GTCGGCGAGG AAAACCGCGG CATGCAATGC ATGTTCACCA TGATGAATCA GGCCCGGCTC
GCGGTCGGCC TGGAAGGCGT CGGCATCGCC GACCGCGCCT ATCAGCAGGC TTTGGCCTTC
GCGCAGGACC GCAAGCAGGG CCGCGCGATC GGCGAGAAGC CCAGCAAATC CGACCCGATC
ATCGTGCACC CCGACGTCAA GCGGATGCTG CTGCAGATGC GGGCGATGAC GGCGGCGGCG
CGCACCATCT GCTACGCCAC CGCGGTTGCG ATCGACATCG CCAACCGCAG CGACGATCCG
GCGATCAAGG CTGCCGCGGC GACCCGCGCC GCGCTGCTGA CGCCGATCGC CAAGGCCTAC
GCCACCGACA TCGGCAACGA GGTTGCCTCG CTCGGCGTGC AGGTCCATGG CGGCATGGGC
TTCATCGAAG AAACCGGCGC GGCGCAGCAC TTTCGCGACG CCCGTATCAC CCCGATCTAC
GAAGGCACCA ACGGCATCCA GGCAATTGAT CTCGTGACCC GCAAGCTGGC GCCGAACGGC
GGCGAAGCGG TGTGGGCGCT GATCAGCGAA CTATCCGCGA CCGTCGACGA GGTCGAGGCC
TCCAACGATC CTTCGTTCGG CACCACCGGC GCGAAACTGC GAGAGGCGCT GGCCGCGCTG
GAGCGCGCCA GCAAATGGCT GCTGGAGCGC GTCGTCAGCG CGCCGAACGA CGCTTTGGCC
GGCGCCACGC CGTATCTGCG GCTGTTCGGC GTGACGCTCG GCGGCTGCGT GCTGGCGAAA
GAAGCGCTGG CGGCGCGCGA CATCGACGGG CTCGGCGATC CGCAGCGCTA CGTCACGCAG
GCGCGGTTCT TCGCCGAGAA CGTCACCGTG CAGGCGACCG CGCTGGAGCG CACGGTGACC
GAAGGCTTCG GCGCGCTGCG CGGCGCCGAC GCGGTTCTGC TGGCCTGA
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| Protein sequence | MRAGRFRGKT AACANRPRSE TRMTYRAPIN DMLLALNHGA GLNAAVIAGH YGDYDSEITA
AVLEEAGRFA SDVLAPLNRV GDEHGIKLQH GKVTTAPGWP DAYQRWIAAG WNAVSGDEAF
GGQGLPLALN AACTEIWAAS NVAFGLCPLL TLSAIEALDA HGSDALKKIY LEKLVSGEWP
GTMQLTEPQA GSDVGALRSR AERYGDGSYR IIGSKIFITY GDHDMTDNIV HFVLARLPDA
PPGTKGISLF LIPKFLVNAD GSLGERNDIY PTGIEHKLGM HAAPTCTMTI GDHGGAVGYL
VGEENRGMQC MFTMMNQARL AVGLEGVGIA DRAYQQALAF AQDRKQGRAI GEKPSKSDPI
IVHPDVKRML LQMRAMTAAA RTICYATAVA IDIANRSDDP AIKAAAATRA ALLTPIAKAY
ATDIGNEVAS LGVQVHGGMG FIEETGAAQH FRDARITPIY EGTNGIQAID LVTRKLAPNG
GEAVWALISE LSATVDEVEA SNDPSFGTTG AKLREALAAL ERASKWLLER VVSAPNDALA
GATPYLRLFG VTLGGCVLAK EALAARDIDG LGDPQRYVTQ ARFFAENVTV QATALERTVT
EGFGALRGAD AVLLA
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