| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3894 |
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| Symbol | |
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| ID | 3936375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3989815 |
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| End bp | 3991569 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906272 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_511836 |
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| Protein GI | 89056385 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0512986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCC CCAACACGAT CACGGCCCTA GCGCGAAACG ACCGCCCGCG CAAATCGGCC
AGCCTTGGGA GAGATCACAT GTCCTACCGC GCGCCCGTCT CCGACATCAC ATTTTGCCTC
GACCACGTCG TGGGCTTTGA CCGGGTTCAG GCCTCCCCCA CATTTGAAGA GGCCACCCCG
GATGTCGTTC AGGCGATCCT GACGGAGGCC GGCCGCATCT GTGAAGAGGT GATCGCACCT
CTCAACCGCG CAGGCGACGA GACGCCCGCC GCGCTGGAGA ACGGCGTGGT GCGCACGTCC
CCCGGATATG CAGACGGCTA CCGGGCGATT GCCGAGGCGG GCTTTGTCGC GATCTCTGCC
GATCCTGACT ATGGCGGAAT GGGTCTGCCC CTGACCGTCA CAACGGCCGT CAACGAGATG
ATTGGCAGCG CGTGTCTGTC GCTGGAATTG AACCCCCTCA TGACCCAGGG CCAGATCGAG
GCGCTGGAGC ATCACGCCAG CGATGCCATC AAAGAGGTGT ACCTGCCCAA GCTGACCTCC
GGCGAATGGT GCGGCACGAT GAATTTGACA GAGCCCCAGG CCGGATCAGA CGTGGGCGCA
CTGACCACCA AAGCCGAGCC TCAGGGCGAC GGCACATATG CGATCAGCGG TCAGAAAATC
TACATCTCCT GGGGTGATCA CGATATGGCG GACAACATCT GCCACCTCGT CCTCGCCCGC
CTGCCCGGCG CGCCCAAGGG GACCAAAGGC ATCAGCCTTT TCCTTGTGCC CAAGAAAATT
CCGGACGCCG ATGGCAACCC CGGCGTCGCC AATAGCCTGC AGGTCGTCAG CATCGAACAC
AAGATCGGGC TGCACGGCTC CCCCACCTGC GTGATGCAAT ATGATGGCGC ACGGGGCTGG
CTGATTGGCG AGGAAAACAA GGGGATGGCC GCGATGTTCA CGATGATGAA CAACGCCCGT
CTAGGTGTGG CCGTCCAAGG TCTGTCCGTG GCGGAGCGGG CCTATCAACA GGCGCTGGCG
TTTGCGACTG ACCGCAAGCA GGGCCGCAGC CTGATTGAGA ATGGCACCGG CACGATCCTC
GACCATGCGG ACGTGCGCCG GATGCTGATG GAGATGAAGG CCGAGATCTT CTCTGTTCGC
GCCATGGCGC TGGACCTCGC TGTATCGCTG GACCTTGAAA AGACTGGCGA CGCACAGGCC
GCGAGCCGTG CGGCCTTCCT GACACCCATC GCCAAAGTTT ATGGGACGGA TACGGGCGTA
AAGCTGGCCA ATATGGGTAT CCAGATCCAT GGTGGCATGG GGGTCATCGA AGAAACGGGC
GCGGCCCAGT TCGTCCGTGA TGTCCGTGTG ACGACGATCT ATGAGGGGAC CACGGGTATT
CAAGCGATGG ACCTCGTGGG GCGTAAACTG ATGGATGGCG GCGCGGCTGC GTTTGCGCTG
CTGGACGAGG TGGAGGCTTT GGCTGACCCC GTCCTCACCC CCATGGCGCA GGCCCTGCGC
AAGACGACCG AGGATGTCCT GGCGCTCGAC ATGAATGATC GTTTCGGGGG CGCGGTGCCC
TTCCTGATGG CCTTCGCCCG CGTGCTCGGC GCATATTACC ACCTGAAGGC TGCCGGCGCT
GGTGATAAGA CCCGCCAAAG CCTGGCGCAT TTCCATATCA CCCGTCTCCT GCCCGAGGCT
CATGCGATGA TGGCGCAGGC GCGCTGCGGG TCCGGGGGGC TCTACGATCT GTCCCCGGAC
GAGCTGGCGG CATAG
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| Protein sequence | MMRPNTITAL ARNDRPRKSA SLGRDHMSYR APVSDITFCL DHVVGFDRVQ ASPTFEEATP
DVVQAILTEA GRICEEVIAP LNRAGDETPA ALENGVVRTS PGYADGYRAI AEAGFVAISA
DPDYGGMGLP LTVTTAVNEM IGSACLSLEL NPLMTQGQIE ALEHHASDAI KEVYLPKLTS
GEWCGTMNLT EPQAGSDVGA LTTKAEPQGD GTYAISGQKI YISWGDHDMA DNICHLVLAR
LPGAPKGTKG ISLFLVPKKI PDADGNPGVA NSLQVVSIEH KIGLHGSPTC VMQYDGARGW
LIGEENKGMA AMFTMMNNAR LGVAVQGLSV AERAYQQALA FATDRKQGRS LIENGTGTIL
DHADVRRMLM EMKAEIFSVR AMALDLAVSL DLEKTGDAQA ASRAAFLTPI AKVYGTDTGV
KLANMGIQIH GGMGVIEETG AAQFVRDVRV TTIYEGTTGI QAMDLVGRKL MDGGAAAFAL
LDEVEALADP VLTPMAQALR KTTEDVLALD MNDRFGGAVP FLMAFARVLG AYYHLKAAGA
GDKTRQSLAH FHITRLLPEA HAMMAQARCG SGGLYDLSPD ELAA
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