Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0555 |
Symbol | |
ID | 6979271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 576308 |
End bp | 578086 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643395267 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002280078 |
Protein GI | 209548161 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.539594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATAAGG CGCCCGTCGA GGAAATCGCG TTCACGTTGA AGCATGTAGC CGGCATGGAC GACGCGATTT CAAAAGGGCT TCTCGGCGAT CTCAGCGAAG ATCTGGTCGA TGCCGTGCTC TCCGAGGCGG GACGTTTTGC CACAGAGGAA GTGGCGCCGC TCGCCGACAT CGGCGACCGC CAGGGCGCCC GTCTGGAAGG CGGCGAGGTC AGGCTGCCGG ACGGCTGGCG CGATCTCTAC CGCAGCTGGA TCGCCGGCGG CTGGAATGGT CTGACGGCGC CCGAAGCCTT TGGCGGCCAG GCCCTGCCGC ATATGCTGAA CGTCGCGGCG CTGGAAATGT GGAATTCCGG CTCCATGGCC TTCGCGCTCG CCCCCACGCT GACGATGGGC GCCATCGAGG CGGTCAGCAC CCATGGCAGC GCCGCGCTGA AGGAAAAATA TCTGGAGAAG ATGGTCTCAG GCGAATGGAC CGGCACCATG AACCTGACGG AACCGCATGC CGGCTCCGAT CTCGGCGTGC TCAAGGCCCG CGCCGAGCGC CGCGCCGACG GCAGCTATCG CATCTTCGGC CAGAAGATCT TCATCACCTG GGGTGAGCAT GACGCGGCCG ACAACATCAT CCATCTCGTG CTCGCCCGCC TGCCGGATGC GCCGGCCGGC ACCCGCGGCA TCTCGCTCTT CCTGGTGCCG AAATTCCTGG TGAACGACGA CGGCTCGCTG GGTGCCCGCA ACGATCTGTT CTGCCACTCG TTGGAGCACA AGCTCGGCAT TCACGGCTCG CCGACCTGCA CGATGATCTA TGGCGACGGC CGGTTCGGCG ACGAAAAGGG GGCTGTGGGC TGGCTGGTTG GCGAGGAGAA CAAGGGCTTG GCCTGCATGT TCACGATGAT GAACAATGCC CGCCTGGCCG TCGGCATGCA GGGCGTGGCG ATCGCCGAGG CCGCCACCCA GAAGGCTGTC GCCTATGCCA AGGAACGCAC CCAGGGCAGG GCGCCCGGCT GGAGCGGGCC CGGCATGAGC CCGATCGTCG AACATCCCGA TGTCGCCCGC ATGCTTCTTA CCATGAAGGC GCTGACGCAA GGGGCGCGCG CCATTTCCTA TGCCTGCGCC CACGCGATCG ACATGTCCCA CCGGGCCGGC GACGTCAGCC GCCACTGGCA GGAGCGTGCC GCGCTTTTGA CCCCGATCGC CAAATCCTTT TCGACCGATG CCGGCGTCGA CGTCGCCTCG CTCGGCATTC AGGTGCATGG CGGCATGGGC TTCATCGAGG AGACCGGTGC GGCGCGTTAT CTGCGCGACG CCCGCATCGC GCCGATCTAC GAGGGCACCA ATGGCATCCA GGCGATCGAC CTCGTCACCC GCAAGCTGCC GCTTTCCGGC GGCGAGCAGG TGAAGGGCTT CATCGCCGAG CTGAAGGAGA TTGCCGAGCG CGTCCGCCGC TCCAATCTCG ATGGTTTCGC CGAGACATCA GTCAGGCTCG ACGCTGCGAT TTCAGATCTC GAAGCGGCGA CCGACTGGCT CACGAAGACG CTTGCCGACG GCAAGGCGGC CGAGGCGCTT TCGGGCGCGA CACCCTATCA GCGCCTGTTC GGCCTCGTGC TCACCGGCTG CTATCTCGCC AAGGGCGCTC TCGCCGAAAG CGGCGATGGC AGGGGCGCGG GCCGCATCGT GCTCTGCCGC TTTGCCGCCG AAAACCTGCT CGCCGAGACC GCAGCCCTTC GCGACCGCGT CGTCAATGGC GCGGCAAGCC TTGCCGCCGC CCGCATCCTG CTTGCCTGA
|
Protein sequence | MYKAPVEEIA FTLKHVAGMD DAISKGLLGD LSEDLVDAVL SEAGRFATEE VAPLADIGDR QGARLEGGEV RLPDGWRDLY RSWIAGGWNG LTAPEAFGGQ ALPHMLNVAA LEMWNSGSMA FALAPTLTMG AIEAVSTHGS AALKEKYLEK MVSGEWTGTM NLTEPHAGSD LGVLKARAER RADGSYRIFG QKIFITWGEH DAADNIIHLV LARLPDAPAG TRGISLFLVP KFLVNDDGSL GARNDLFCHS LEHKLGIHGS PTCTMIYGDG RFGDEKGAVG WLVGEENKGL ACMFTMMNNA RLAVGMQGVA IAEAATQKAV AYAKERTQGR APGWSGPGMS PIVEHPDVAR MLLTMKALTQ GARAISYACA HAIDMSHRAG DVSRHWQERA ALLTPIAKSF STDAGVDVAS LGIQVHGGMG FIEETGAARY LRDARIAPIY EGTNGIQAID LVTRKLPLSG GEQVKGFIAE LKEIAERVRR SNLDGFAETS VRLDAAISDL EAATDWLTKT LADGKAAEAL SGATPYQRLF GLVLTGCYLA KGALAESGDG RGAGRIVLCR FAAENLLAET AALRDRVVNG AASLAAARIL LA
|
| |