More than 300 homologs were found in PanDaTox collection
for query gene Bphy_3938 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  65 
 
 
594 aa  778    Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
600 aa  1229    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  65.17 
 
 
594 aa  758    Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  61.03 
 
 
597 aa  704    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  59.63 
 
 
596 aa  713    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  61.46 
 
 
596 aa  715    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  68.33 
 
 
596 aa  840    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  68.67 
 
 
596 aa  865    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  56.46 
 
 
593 aa  658    Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  69.33 
 
 
596 aa  848    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  65.3 
 
 
594 aa  793    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  62.62 
 
 
596 aa  736    Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  67 
 
 
600 aa  835    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  65.41 
 
 
594 aa  796    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  69.67 
 
 
596 aa  882    Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  68.67 
 
 
596 aa  865    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  60.63 
 
 
596 aa  744    Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  70 
 
 
596 aa  871    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  69 
 
 
596 aa  851    Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  69 
 
 
596 aa  849    Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  62.29 
 
 
595 aa  726    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  68.67 
 
 
596 aa  845    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  69.17 
 
 
596 aa  871    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  65 
 
 
594 aa  775    Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  70.67 
 
 
596 aa  871    Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  60.13 
 
 
596 aa  704    Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  59.18 
 
 
593 aa  686    Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  59.8 
 
 
596 aa  720    Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  69.67 
 
 
596 aa  877    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  69.23 
 
 
595 aa  870    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  61.46 
 
 
596 aa  715    Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  61.75 
 
 
593 aa  715    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  53.58 
 
 
598 aa  652    Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  64.83 
 
 
594 aa  786    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  69.5 
 
 
596 aa  852    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  59.8 
 
 
596 aa  710    Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  68.67 
 
 
596 aa  865    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  59.47 
 
 
596 aa  700    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  61.46 
 
 
596 aa  740    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  58.27 
 
 
605 aa  702    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  68.83 
 
 
596 aa  843    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  69.5 
 
 
596 aa  852    Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  61.43 
 
 
595 aa  701    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  52.41 
 
 
598 aa  612  9.999999999999999e-175  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.41 
 
 
597 aa  601  1e-170  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  51.9 
 
 
594 aa  573  1.0000000000000001e-162  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2553  acyl-CoA dehydrogenase domain-containing protein  73.6 
 
 
367 aa  571  1e-161  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0929  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  73.6 
 
 
367 aa  571  1e-161  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  50.92 
 
 
593 aa  560  1e-158  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  51.56 
 
 
593 aa  552  1e-156  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  50.6 
 
 
586 aa  553  1e-156  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  50.68 
 
 
595 aa  555  1e-156  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.26 
 
 
592 aa  551  1e-155  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  49.66 
 
 
594 aa  549  1e-155  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  49.49 
 
 
592 aa  547  1e-154  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  48.66 
 
 
593 aa  540  9.999999999999999e-153  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  49.57 
 
 
593 aa  536  1e-151  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  47.75 
 
 
594 aa  538  1e-151  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  48.22 
 
 
593 aa  534  1e-150  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  47.98 
 
 
592 aa  531  1e-149  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  47.87 
 
 
615 aa  530  1e-149  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  49.66 
 
 
587 aa  526  1e-148  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  49.49 
 
 
587 aa  525  1e-147  Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  48.04 
 
 
593 aa  522  1e-147  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  48.84 
 
 
614 aa  520  1e-146  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  50.76 
 
 
593 aa  511  1e-143  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  50.47 
 
 
592 aa  505  9.999999999999999e-143  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  49.32 
 
 
587 aa  508  9.999999999999999e-143  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  47.51 
 
 
589 aa  502  1e-141  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
579 aa  503  1e-141  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  47.31 
 
 
592 aa  501  1e-140  Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  48.47 
 
 
592 aa  497  1e-139  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  46.82 
 
 
572 aa  494  9.999999999999999e-139  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  45.12 
 
 
594 aa  492  9.999999999999999e-139  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  45.1 
 
 
586 aa  494  9.999999999999999e-139  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  47.65 
 
 
592 aa  494  9.999999999999999e-139  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
593 aa  489  1e-137  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  44.5 
 
 
591 aa  486  1e-136  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  46.84 
 
 
596 aa  480  1e-134  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  44.9 
 
 
598 aa  480  1e-134  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_008048  Sala_1770  acyl-CoA dehydrogenase-like protein  44.11 
 
 
580 aa  481  1e-134  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.270198 
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  44.54 
 
 
589 aa  476  1e-133  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  42.98 
 
 
600 aa  478  1e-133  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  45.08 
 
 
597 aa  472  1e-132  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  43.4 
 
 
597 aa  472  1e-132  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  44.41 
 
 
598 aa  474  1e-132  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0835  acyl-CoA dehydrogenase domain-containing protein  43.87 
 
 
585 aa  471  1.0000000000000001e-131  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00122363 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  43.26 
 
 
598 aa  469  1.0000000000000001e-131  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  45.36 
 
 
592 aa  468  1.0000000000000001e-131  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4489  acyl-CoA dehydrogenase domain-containing protein  46.07 
 
 
581 aa  469  1.0000000000000001e-131  Caulobacter sp. K31  Bacteria  normal  normal  0.376796 
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  47.93 
 
 
592 aa  471  1.0000000000000001e-131  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  42.41 
 
 
597 aa  466  9.999999999999999e-131  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  42.64 
 
 
597 aa  468  9.999999999999999e-131  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  42.41 
 
 
597 aa  466  9.999999999999999e-131  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  44.95 
 
 
592 aa  467  9.999999999999999e-131  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  43.51 
 
 
596 aa  466  9.999999999999999e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  42.95 
 
 
596 aa  468  9.999999999999999e-131  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_008254  Meso_0723  acyl-CoA dehydrogenase-like  45.57 
 
 
591 aa  466  9.999999999999999e-131  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  42.34 
 
 
596 aa  462  1e-129  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  45.44 
 
 
595 aa  464  1e-129  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
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