| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3938 |
|---|
| Symbol | |
|---|
| ID | 6247070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 907685 |
|---|
| End bp | 909487 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595702 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001860109 |
|---|
| Protein GI | 186472767 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATC GCGCGCCCAT CAAGGACATG TTGTTTGTGA TGCAGCAACT GGCGGGTCTC
GACAACGTGA TCCGCTTGCC GGGCTACGCG GACGCCACGG CCGCGACTGT GCAATCGGTG
CTCGAAGAAG CCGGCAAGCT GTGCGGCGAA ATCTGGGCGC CCCTGAACGC GGTGGGCGAC
CGTCAGCCGG CGCAATGGCG CGATGGTCGG GTGAGTGCTT CGCCGGGATT CGAGCAGGCC
TTCCGGCACT TCGTCGACGG CGGCTGGCAG GGTGTCGCGC ATCCTTCCGA ATACGGCGGA
CAGGGTCTTC CCAAACTCGT CGGAGCCGCA TGCATCGAAA TGCAGTGTGC GGCGAACCTG
TCGCTCGCGA CGTGCCCTTC GTTGACCGAT GGCGCAATTG AAGCGCTGCT GATGGCGGGC
AGCGACGCAC AGAAGCGGCG TTATCTGCCG CGCCTGGTGT CCGGCGAATG GTCCGGCACG
ATGAATCTCA CAGAGCCGCA GGCCGGCTCC GATCTCGGAC TGCTGCGTAC GCGCGCCGAA
CGCCAACACG ACGGCTCTTA TCGGGTCTTC GGCACCAAGA TCTTCATTTC GTGGGGCGAA
CACGAAATGA GCCGCAACAT CGTGCATCTC GTGCTTGCGC GCACGCCGGA TGCGCCCGCT
GGCGTCAAGG GCATTTCACT CTTTCTGGTG CCGAAGTATC TAGTCGATGA AGACGGCCAC
GCGGGCGAGC GTAACGACGT CAATTGCGTA TCGATCGAAC ACAAGATGGG GCTCACGGGT
AGCCCGACAG CCGTATTGCA ATACGGAGAC CGCGGCGGCG CGATCGGCGA GCTGATCGGC
GAGGAAAATC GCGGCCTCGA GTACATGTTC GTGATGATGG TCGCGGCGCG CTTTGCCGTG
GGCACGCAGG GAATCGCTAT CGCCGAGCGC GCCTATCAGA AGGCGCGCAG CTACGCGAAG
GAGCGCGTAC AGAGCCGTCC CGTCGATGGC TCCGCGCAGC AATCCGTGAC GATCATCAAC
CACCCGGACG TACGTAGAAT GCTCGGCACC ATGCGTGCGC TCACAGAGGC GTCGCGAGCG
TTGGCGTACG TAGCGGCCGC GCATTCCGAC CATGCGCAAC GCCATCCCGA TGCGCAGGCG
CGCGCCATGC ATCACGGGTT GTACGAATTC ATGGTGCCGA TTGTGAAGGG GTGGAGTACG
GAGATGTCGG TGGACGTCGC AAGCCTCGGT GTGCAGATTC ACGGTGGCAT GGGCTTTATC
GAGGAAACAG GCGCCGCGCA GTTCTATCGC GACGCGCGCA TCCTGCCGAT TTACGAGGGC
ACCACGGCAA TACAGAGCAA CGATCTCATC GGCCGCAAGA CCGTGCGTGA CGGCGGTGCA
GTCGCAAAGT CGCTCATCGG CGAAATTGGC GAGGTCGTGC AGGCGTTGGA GGCAAGCCCG
GCATTCGCGG ACAACGCAGC TTTCAAAGCG ATGCACCGGC ATCTCGCGGC GGGCAATCAG
TCGTTTGCGA ATGCCGTCGC GTTCATGCTG GAGCACGCCG GAAAAGACCC GAATGCGGCG
TATGCCGGGG GGGTCGCATA TCTGAAGCTC GCCGGCATTG TGCTCGGTGG CTGGCAGATG
GCGCGGGCGC TGCTCGCTTC GCAGCGGCTC ATGCGCGAAG ATCCGCTATT TCACGGCGCC
AAGATTGCCA CCGCGCATTG CTATGCCAAT TACGTGCTGC CGCAGGCAGC GGCATTCGAG
GCAGCGATCG TCGGCGCGCA AGGCGGCGAA GGCGTGCTCG GGCTCCATGA GGATGCGTTC
TGA
|
|---|
| Protein sequence | MSYRAPIKDM LFVMQQLAGL DNVIRLPGYA DATAATVQSV LEEAGKLCGE IWAPLNAVGD
RQPAQWRDGR VSASPGFEQA FRHFVDGGWQ GVAHPSEYGG QGLPKLVGAA CIEMQCAANL
SLATCPSLTD GAIEALLMAG SDAQKRRYLP RLVSGEWSGT MNLTEPQAGS DLGLLRTRAE
RQHDGSYRVF GTKIFISWGE HEMSRNIVHL VLARTPDAPA GVKGISLFLV PKYLVDEDGH
AGERNDVNCV SIEHKMGLTG SPTAVLQYGD RGGAIGELIG EENRGLEYMF VMMVAARFAV
GTQGIAIAER AYQKARSYAK ERVQSRPVDG SAQQSVTIIN HPDVRRMLGT MRALTEASRA
LAYVAAAHSD HAQRHPDAQA RAMHHGLYEF MVPIVKGWST EMSVDVASLG VQIHGGMGFI
EETGAAQFYR DARILPIYEG TTAIQSNDLI GRKTVRDGGA VAKSLIGEIG EVVQALEASP
AFADNAAFKA MHRHLAAGNQ SFANAVAFML EHAGKDPNAA YAGGVAYLKL AGIVLGGWQM
ARALLASQRL MREDPLFHGA KIATAHCYAN YVLPQAAAFE AAIVGAQGGE GVLGLHEDAF
|
|---|
| |