Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0637 |
Symbol | |
ID | 3676250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 716730 |
End bp | 718508 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637712188 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_317256 |
Protein GI | 75674835 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.337916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTATC GCGCACCGAT CAGCGACATG CTCCTCGCTC TCGACGGCGC CGGGCTCCGG GCCGCGGTCG AGGCCGGCCA TTACGGTGAT TTCGATGCCG AAATAACGAC CGTGGTGCTG GAGGAAGCCG GCCGTTTCGC GAGCGACGTG CTGGCGCCGC TCAACCGCGC CGGCGACCGG CACGGCGCGC GGCTGCAAGA CGGCCGCGTG ACGACCGCGC CGGGATGGGC CGATGCCTAC AGGCGCTGGA CGGCGGCGGG TTGGAACGCA GTCTCCGGAC CGGAGGATTT CGGCGGACAA GGCCTGCCGC TTGCCATCAA CGCCGCCTGC ACCGAAATCT GGAGCGCGGC GAACACCGCC TTCGGCCTGT GCCCGCTGGT GACGCTGAGC GCGGTCGAAG CCCTCGCCGC GCATGGCAGC GACACGCTGA AGACCATCTA TCTCGGAAAG CTGGTGTCCG GCGAATGGAC CGGCACGATG CAACTGACCG AGCCGCAGGC GGGCTCGGAC GTCGGCGCGC TGCGCAGCCG CGCCGAGCGC GCATCCGACG GCAGCTATCG GATCTTCGGC ACCAAGATCT TCATCACCTA TGGCGACCAT GACATGACCG ACAACATCGT GCATTTCGTG CTTGCGCGAC TGCCCGATGC GCCTGACGGC ACCAGGGGAA TTTCCCTGTT CCTGATTCCG AAATTCCTCG TCGACGCGGA CGGCTCGCTC GGCGCGCGCA ACGACATCCA CGCCAGCGGC ATCGAGCACA AGCTCGGCAT CCACGGCTCG CCGACATGCA CCATGACCAT GGGCGATGAC GGCGGCGCGA TCGGCTATCT GATCGGCGAG GAAAATCGCG GCATGCGGTG CATGTTCACG ATGATGAATC AGGCCCGGCT CTGTGTCGGC CTCGAGGGTG TCGGCATCGC CGAACGCGCC AGCCAGCAGG CGCTCGCATA TGCGCGGGAG CGCAGGCAGG GCCGCGCCGC CGGCACGTCA GACGGCATGA GCCCCATCAT CGCCCATCCC GACGTCAAGC GCATGCTGAT GCAGATGCGC GCGCTCACCG CCGCGGCCCG CGCCATCTGC TACGCCACCG CCGTTTCGCT GGATATGGCG GCGCGCGCGG CCGATCCCGA CGTGCGCACG GCCGCCGCCG CACGCGGCGC GCTGCTGACG CCGATAGCAA AGGCCTTTTC GACCGACATC GGCAACGAGG TCGCATCGTT AGGCATTCAG GTCCACGGCG GCATGGGCTT CATCGAGGAG ACCGGCGCGG CGCAGCACTA CCGCGACGCG CGCATCACCT CGATCTACGA GGGGACCAAC GGCATCCAGG CGATCGACCT GGTGACGCGA AAGCTTGCGG CGGATGACGG CGCGGCGGTG TCGGCGCTGC TCGACGAACT CTCGGACACC GTCAAGCGCG TGGAAGCCTC GAACGATCCC GCGTTCGGCA CGACCGGCGA GAGACTGCGC GATGCGCTCG GGTCGCTCGA ACGCGCGGGC AAATGGCTGC TGGAGCGGCT CGAATCGTCG CCTAACGATG CGCTGGCGGG CGCCACGCCT TATCTGCGCC TGTTCGGATC GACGCTCGGC GGATGCAAGC TCGCGGAGGA AGCGCTCGCG GCGCGCGAAT CCAGCGCGGA ATTCGGCGAC CCTCGCCGTT ATGTCACGCT GGCGCGTTTC TTCGCCGAGA CCATCGCCGT GCAGGCTCCG GCGCTGGAAC GCACTGTGAT CGACGGCGCA GACGCCGTGA ACGGCGCCGA CACGGTTCTG CTGGCGTGA
|
Protein sequence | MTYRAPISDM LLALDGAGLR AAVEAGHYGD FDAEITTVVL EEAGRFASDV LAPLNRAGDR HGARLQDGRV TTAPGWADAY RRWTAAGWNA VSGPEDFGGQ GLPLAINAAC TEIWSAANTA FGLCPLVTLS AVEALAAHGS DTLKTIYLGK LVSGEWTGTM QLTEPQAGSD VGALRSRAER ASDGSYRIFG TKIFITYGDH DMTDNIVHFV LARLPDAPDG TRGISLFLIP KFLVDADGSL GARNDIHASG IEHKLGIHGS PTCTMTMGDD GGAIGYLIGE ENRGMRCMFT MMNQARLCVG LEGVGIAERA SQQALAYARE RRQGRAAGTS DGMSPIIAHP DVKRMLMQMR ALTAAARAIC YATAVSLDMA ARAADPDVRT AAAARGALLT PIAKAFSTDI GNEVASLGIQ VHGGMGFIEE TGAAQHYRDA RITSIYEGTN GIQAIDLVTR KLAADDGAAV SALLDELSDT VKRVEASNDP AFGTTGERLR DALGSLERAG KWLLERLESS PNDALAGATP YLRLFGSTLG GCKLAEEALA ARESSAEFGD PRRYVTLARF FAETIAVQAP ALERTVIDGA DAVNGADTVL LA
|
| |