| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2983 |
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| Symbol | |
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| ID | 6280749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3366262 |
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| End bp | 3368052 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622553 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001896601 |
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| Protein GI | 187924959 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.143309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00237955 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTATA CGGCGCCCAT CAAAGACATG CTGTTCGTCA TGAAAGAACT GGCGGGTCTC
GAAGACATCG CGACCTTGCC GGGCTTCGAA GACGCGAACC TCGAGACCGC ACAGGCTGTG
CTCGAAGAAT CGGCGAAACT GTGCGGTAGC GTGCTGGCGC CGCTGAATGT CGAAGGCGAT
CGCAATCCGA GCAGTTGGAA AGACGGCGTG GTCACCGCGA CGCCCGGCTT CAGGGAAGCA
TTTCGCCAGT TCGGTGAAGG CGGCTGGCAA GGCGTGCAAC ATCCCGTCGA CTACGAAGGC
CAGGGCCTGC CGAAGCTGAT CGCGACGCCG TGCGTTGAAA TGCTCAACGC GTCGAACCTG
TCGTTCGCGC TGTGTCCGTT GCTGACCGAC GGCGCGATCG AAGCGCTGCT CACCGCCGGC
ACCGAAGCGC AAAAACAAAC CTATGTGCCC AAACTGATTT CGGGCGAATG GACCGGCACG
ATGAACCTGA CCGAGCCGCA GGCCGGTTCC GATCTCGCGC TGGTGCGTAC GCGCGCCGAG
CCGCAGGGCG ACGGTTCGTT CAAGCTGTTC GGCACGAAGA TTTTCATCAC GTGGGGCGAG
CACGACATGG CGAAGAACAT CGCGCATCTC GTGCTGGCGC GCACGCCGAA TGCACCGGAA
GGCGTGAAAG GCATTTCGCT CTTTATCGTG CCGAAGTTTC TCGTCAACGA AGACGGTTCG
CTCGGCGAGC GCAACGACGT GCATTGCGTG TCGATCGAAC ACAAGCTCGG CATCAAGGCG
AGCCCGACCG CGGTGCTGCA ATTCGGCGAC CACGGCGGCG CGATCGGTCA TCTGATCGGC
GAAGAGAATC GCGGCCTCGA GTACATGTTC ATCATGATGA ACGCGGCGCG TTTTGCTGTC
GGCATGCAGG GCGTCGGCAT TTCGGATCGG GCGTATCAGA AGGCGGTCGC GTATGCGAAA
GATCGCGTGC AAAGCCGTCC CGTCGATGGC TCCGCGAAAC AGTCGGTCGC GATCATTCAG
CATCCGGACG TGCGTCGCAT GCTCTCGACC ATGCGCGGCC TCACCGAAGC ATCGCGCGCG
CTGGCTTACG TGGCCGCGGC GCATTGCGAC ATCGCGCATC GTCATCCGGA CGAAGCAAAG
CGCGCCGAGC ATCAGGCGAT CTACGAGTAT CTCGTGCCGA TCGTGAAGGG CTGGAGCACC
GAGCTGTCGA TCGACGTGAC GAGCCTCGGC GTGCAGGTGC ACGGCGGTAT GGGCTTCATC
GAAGAAACCG GCGCCGCGCA GTACTACCGT GACGCACGCA TCCTGCCGAT CTACGAAGGC
ACGACCGCGA TTCAGGCCAA CGATCTGATC GGCCGCAAGA CTGTGCGCGA CGGCGGCAAG
GTGGCGAAGT CGCTGCTCGC CGGGGTGGCG GAAACGATCG AGGCACTCGG CGCGCAGCAA
GGCCCTGCGT TCGACTCGAT GAAGAAGTAT CTCGCGCAGG GTCATCAATC GTTGGGCGCG
GCGGTAGATT TCGTCGTCGC CAATACGAAG GGCGATCCGA ACGCGGTGTT CGCCGGCAGC
GTGCCGTATC TGAAGCTCGC GGGCATTGTG CTGGGCGGCT GGCAGATGGC GCGTGCGTTG
CTGGTGGCGG CGCAAAAGCG CGACGAAGAT CCGTCGTTCT ACGGCGCGAA GATCGCGACC
GCGCAGTTCT ACGCGGAGCA TGTGCTGCCG CTGACATCGG CACTTGAAGC GTCGATTGTC
AGCGCAAAGG GTGGAGAGAG TGTGCTGGCT TTGTCGGAAG ATCAGTTCTA A
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| Protein sequence | MSYTAPIKDM LFVMKELAGL EDIATLPGFE DANLETAQAV LEESAKLCGS VLAPLNVEGD
RNPSSWKDGV VTATPGFREA FRQFGEGGWQ GVQHPVDYEG QGLPKLIATP CVEMLNASNL
SFALCPLLTD GAIEALLTAG TEAQKQTYVP KLISGEWTGT MNLTEPQAGS DLALVRTRAE
PQGDGSFKLF GTKIFITWGE HDMAKNIAHL VLARTPNAPE GVKGISLFIV PKFLVNEDGS
LGERNDVHCV SIEHKLGIKA SPTAVLQFGD HGGAIGHLIG EENRGLEYMF IMMNAARFAV
GMQGVGISDR AYQKAVAYAK DRVQSRPVDG SAKQSVAIIQ HPDVRRMLST MRGLTEASRA
LAYVAAAHCD IAHRHPDEAK RAEHQAIYEY LVPIVKGWST ELSIDVTSLG VQVHGGMGFI
EETGAAQYYR DARILPIYEG TTAIQANDLI GRKTVRDGGK VAKSLLAGVA ETIEALGAQQ
GPAFDSMKKY LAQGHQSLGA AVDFVVANTK GDPNAVFAGS VPYLKLAGIV LGGWQMARAL
LVAAQKRDED PSFYGAKIAT AQFYAEHVLP LTSALEASIV SAKGGESVLA LSEDQF
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