| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4282 |
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| Symbol | |
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| ID | 7971366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4524005 |
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| End bp | 4525795 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794868 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002946160 |
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| Protein GI | 239817250 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTACA CCGCCCCCCT CAAGGACATG CTGTTCGACA TCGAGCACCT GGCCAACATC
GGCGAGATCG CCAGGCTGCC GGGTTTCGAG GACGCCGGCC TCGAAACCGC GCAGGCCGTG
CTCGAAGAAT GCGCGCGCTT CAACCAGGAC GTGGTGGCGC CGCTGAACAT CGAGGGCGAC
CGCAACCCCT CGTCCTTCAA GGACGGCCAG GTCGCGACCA CGCCGGGCTT CAAGGAAGCC
TTTGCGCAGT ACGTGTCGGG CGGCTGGCAG GGGCTGCAGC ATCCGGCGGA CTTCGGCGGC
CAGGGCCTGC CCAAGACCAT CGGCGCGGCC TGCGGCGAGA TGCTCAACTC GGCCAACATG
AGCTTCGCGC TGTGTCCGCT CTTGAGCGAC GGCGCCATCG AGGCGCTGCT CACGGCCGGC
TCCGACGAGC TCAAGGCGGT GTACCTCGAG AAGCTGGTGA GCGGCCAGTG GACCGGCACC
ATGAACCTCA CCGAGCCGCA GGCCGGCAGC GACCTTGCGC TGGTGCGCAG CCGCGCCGAA
CCGCAACCTG ACGGCACTTA CAAGGTCTTC GGCACCAAGA TCTTCATCAC CTACGGCGAG
CACGACATGG CCGAGAACAT CGTGCACCTG GTGCTGGCAC GCGTGACCGG CGCGCCCGAG
GGCGTGAAGG GCATCAGCCT GTTCGTGGTG CCCAAGTTCC TCGTCGGCAA GGACGGCTCG
CTCGGTGCGC GCAACGACGT GCACTGCGTG AGCATCGAGC ACAAGATGGG CATCAAGGCC
TCGCCCACCG CCGTGCTGCA GTACGGCGAC CACGGCGGTG CCGTCGGTTA TCTCGTGGGC
CAGGAGAACC GCGGCCTCGA GTACATGTTC ATCATGATGA ACTCGGCCCG CTATGCCGTG
GGCATGCAGG GCATCGCGAT TGCCGAGCGC GCCTACCAGC ACGCCGTGGC CTACGCCAAG
GACCGCGTGC AGAGCCGCCC GGTCGATGGT TCGATGAACG CGAGCGCGCC CATCATCCAC
CACCCCGACG TCAAGCGCAT GCTGATGACG ATGCGCGCCT ACACCGAAGG CTGCCGCGCC
ATGGCCTCGG TGGCCGCGGC CGCGTACGAC GCCGCGCACC ACCACCCCGA TGCCGAGGCG
CGCAAGCAGA ACCAGGCCTT CTACGAATTC ATGGTGCCGC TCGTGAAGGG CTACAGCACC
GAGATGAGCC TGGAAGTGAC CTCGCTGGGC GTGCAGGTGC ATGGCGGCAT GGGCTTCATC
GAGGAGACCG GCGCGGCGCA GTACTACCGC GACGCCAAGA TCCTCACGAT CTACGAGGGC
ACCACTGCGA TCCAGGCCAA CGACCTCGTG GGCCGCAAGA CCGCGCGCGA CGGCGGCCAG
ACCGCCAAGG CCATTGCCGC GCAGATCGAG AAGACCGAGG CCGAACTGGC CAGGAGCAGC
AGCCCCGCCG CGGCCGCCGT CCTCAAGCGC CTGAAGCCCG CGCGCGAGGC CTTCATCGAG
GTGGTCGACT TCGTCGCGGG CCAGACCAAG GCGTCGCCCA ACGCGGTGTT CGCGGGCAGC
GTGCCCTACC TGATGCTCGC GGGCAACCTC GTGGCGGGCT GGCAGCTGGC ACGCTCGCTG
ATCATTGCAG CGGACCTGGC GTCGCACAAC GTCGACGTGG ATTTCATGCA GGCCAAGACC
GCGACCGCGC GCTTCTATGC CGAGCACATC CTGAACAAGG TGCCGGGCCT GCGCGACAGC
ATCGTCGATG GTGCCGAGAG CGTCACGGCG CTACCAATCG ATCTGTACTG A
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| Protein sequence | MSYTAPLKDM LFDIEHLANI GEIARLPGFE DAGLETAQAV LEECARFNQD VVAPLNIEGD
RNPSSFKDGQ VATTPGFKEA FAQYVSGGWQ GLQHPADFGG QGLPKTIGAA CGEMLNSANM
SFALCPLLSD GAIEALLTAG SDELKAVYLE KLVSGQWTGT MNLTEPQAGS DLALVRSRAE
PQPDGTYKVF GTKIFITYGE HDMAENIVHL VLARVTGAPE GVKGISLFVV PKFLVGKDGS
LGARNDVHCV SIEHKMGIKA SPTAVLQYGD HGGAVGYLVG QENRGLEYMF IMMNSARYAV
GMQGIAIAER AYQHAVAYAK DRVQSRPVDG SMNASAPIIH HPDVKRMLMT MRAYTEGCRA
MASVAAAAYD AAHHHPDAEA RKQNQAFYEF MVPLVKGYST EMSLEVTSLG VQVHGGMGFI
EETGAAQYYR DAKILTIYEG TTAIQANDLV GRKTARDGGQ TAKAIAAQIE KTEAELARSS
SPAAAAVLKR LKPAREAFIE VVDFVAGQTK ASPNAVFAGS VPYLMLAGNL VAGWQLARSL
IIAADLASHN VDVDFMQAKT ATARFYAEHI LNKVPGLRDS IVDGAESVTA LPIDLY
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