| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4454 |
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| Symbol | |
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| ID | 3912270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5041612 |
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| End bp | 5043393 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637886357 |
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| Product | Acyl-CoA dehydrogenase-like |
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| Protein accession | YP_488048 |
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| Protein GI | 86751552 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.456849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATC GCGCTCCGAT CGACGACATC CTGCTCTCCC TCAACCATGG CGCCGGCCTG
CAAGCCGCGG TGGCGGCGGG GCATCTCGGC GACTATGACG GCGAGCTCAC CGCGCAGGTG
CTGGAAGAGG CCGGCAAGTT CGCCGGCGAC ATTCTGGCGC CGCTGAACCG GATCGGCGAC
AAGCACGGCA TCAAGCTGGC GCACAACGCC GTCACCACCG CGCCGGGCTG GCCGGACGCC
TATCAGCGCT GGATCGCGGC GGGCTGGAAT GCGGTGTCGG GCCCGGAGGA CTTCGGCGGC
CAGGGCCTGC CGGGCGCGCT CAACGCGGTA TGCACCGAAC TCTGGGCGGC GTCGAACATG
GCGTTCGGGC TGTGCCCGCT GCTGACGCTG TCGGCGATCG ATGCGCTGCA TGCGCACGGC
AGCGACGAGT TGAAGCGCAT CTATCTCGGC AAGCTGGTGT CGGGCGAATG GACCGGCACG
ATGCAGCTCA CCGAGCCGCA GGCCGGCTCC GACGTCGGCG CGCTGCGCAC CCGCGCCGAG
CGCGCGGCCG ACGGCAGCTA CAGGATCTTC GGCAGCAAGA TCTTCATCAC CTATGGCGAC
CACGACATGA CCGACAACAT CGTGCATTTC GTGCTCGCGC GATTGCCCGA TGCGCCCGCC
GGCACCAAGG GCATTTCGCT GTTCCTGATT CCGAAATTCC TGGTCAATGC CGACGGCACG
CTGGGCGCGC GCAACGACAT CTTCCCGAGC GGCGTCGAGC ACAAGCTCGG CATCCACGCC
TCGCCGACCT GCACCATGCA GATGGGCGAT CAGGGCGGCG CGATCGGCTA TCTGATCGGC
GAGGAAAATC GCGGCATGCA GTGCATGTTC ACGATGATGA ATCAGGCCCG CCTCGGCGTC
GGCCTCGAAG GCGTCGGCAT CGCCGACCGC GCCTATCAGC AGGCCTTGGC CTATGCGCAG
GAGCGCAAGC AGGGCCGCGC CATCGGTAGC GACAGCAAAG GCTCCGACCC GATCATCAAG
CATCCCGACG TCAAGCGCAC GCTGCTGCTG ATGCGGGCGC TGACCGGCGC GGCGCGCACG
ATCTGCTATT CGACCGCGGT GGCGCTGGAC ATCGCGGCGC GCAGCAGCGA TCCGAAGGTG
AAGGCCGCGG CGGCCGCGCG CGCGGCGCTG CTGACGCCGA TCGCCAAGGC GTTCTCCACC
GACATCGGCA CCGAGGTCGC CTCGCTCGGC GTGCAGATCC ACGGCGGCAT GGGCTTCATC
GAGGAAACCG GCGCCGCGCA GCATTATCGC GACGCGCGCA TCGCGCCGAT CTACGAAGGC
ACCAACGGCA TCCAGTCGAT CGATCTCGTC ACCCGCAAGC TCGGCGCCCA AGGCGGCGCC
TCGGTGTTCG CGCTGCTCGA CGAACTATCC ATCATCGTCA AGGACGTCGA AGCCTCGAAC
GATCCGGCGT TCGGCGCCAC CGGCGTGCGG CTGCGCGACG CGCTGGGCGC GCTCGACCGC
ACCAGCAGAT ACTTGCTGGA GAAGCTCGGA GCCTCGCCGA ACGACGCGCT GGCCGGCGCG
ACGCCGTATC TGCGGCTGTT CGGATCGACG CTCGGCGGCT GCGCGCTGGC CGCGGAGGCG
CTGGCCGCGC GCAACCTCGA CGGCGCGAGC GATCCGGCGC GCGCGATCAC GCTGGCGCGG
TTCTTCGCCG AGACCGTCGC GGTGCAGGCG GGCGCGCTGG AGCGCAGCGT GGTCGACGCC
GCCGCGGTCC TGGCCACCGC CGACGCCGTG CTGACCGCGT AG
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| Protein sequence | MTYRAPIDDI LLSLNHGAGL QAAVAAGHLG DYDGELTAQV LEEAGKFAGD ILAPLNRIGD
KHGIKLAHNA VTTAPGWPDA YQRWIAAGWN AVSGPEDFGG QGLPGALNAV CTELWAASNM
AFGLCPLLTL SAIDALHAHG SDELKRIYLG KLVSGEWTGT MQLTEPQAGS DVGALRTRAE
RAADGSYRIF GSKIFITYGD HDMTDNIVHF VLARLPDAPA GTKGISLFLI PKFLVNADGT
LGARNDIFPS GVEHKLGIHA SPTCTMQMGD QGGAIGYLIG EENRGMQCMF TMMNQARLGV
GLEGVGIADR AYQQALAYAQ ERKQGRAIGS DSKGSDPIIK HPDVKRTLLL MRALTGAART
ICYSTAVALD IAARSSDPKV KAAAAARAAL LTPIAKAFST DIGTEVASLG VQIHGGMGFI
EETGAAQHYR DARIAPIYEG TNGIQSIDLV TRKLGAQGGA SVFALLDELS IIVKDVEASN
DPAFGATGVR LRDALGALDR TSRYLLEKLG ASPNDALAGA TPYLRLFGST LGGCALAAEA
LAARNLDGAS DPARAITLAR FFAETVAVQA GALERSVVDA AAVLATADAV LTA
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