Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1298 |
Symbol | |
ID | 4785020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1405852 |
End bp | 1407642 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640089864 |
Product | putative acyl-CoA dehydrogenase oxidoreductase protein |
Protein accession | YP_001020495 |
Protein GI | 124266491 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0939697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACC AGGCCCCCGT CAAGGACATG CTGTTCTGCA TGCAGGAACT CGCGGCGCTC GAGGAAGTGG CCAGGTTGCC TGGCTTCGAG GACGCCGGCA TCGACACGGC CCAGGCCGTG CTCGAGGAGT GCGCCAAGTT CAACGAGGGG GTGGTGGCGC CGCTCAACTG GGAAGGGGAC AAGCAGCCCT CGTCCTGGAA GGACGGTCGT GTCACCACGA CGCCGGGCTT CAAGGAGGCC TTCCGCGGGT TCGTCGAGGG TGGCTGGCAG GGGCTGCAGC ATTCGGTCGA CTTCGGCGGG CAGGGTCTGC CCAAGACCAT TGGCTCGGCC TGCGGCGAGA TGCTCAACAG CGCCAACCTC AGCTTCGCGC TGTGTCCCTT GCTGACCGAC GGCTGCATCG AGGCGCTGCT GACCGCCGGC TCCGAGGCGC AGCAGCAGAC CTACATCCCG AAGATGATCT CCGGCCAGTG GACCGGTACG ATGAACCTGA CCGAGCCGCA GGCCGGCTCC GACCTCGCGC TGGTGCGCAC GCGCGCCGAG CCGCAGCCTG ATGGCAGCTT CAAGCTGTTC GGTACCAAGA TCTTCATCAC CTACGGTGAG CACGACATGG CCGAGAACAT CGTCCATCTG GTGCTGGCCC GCGTCAGCGG CGCGCCGGAG GGCGTGAAGG GCATCTCGCT GTTCATCGTG CCCAAGTTCC TCGTCAAGGC CGATGGTTCG CTTGGCGAGC GCAACGACGT GCACTGCGTC AGCATCGAGC ACAAGCTGGG CATCAAGGCC AGCCCGACCG CGGTGCTGCA GTACGGCGAC CACGGTGGCG CGGTGGGCTA CCTGGTCGGC CAGGAGAACC GCGGCCTCGA GTACATGTTC ATCATGATGA ACGCGGCCCG CTATGCCGTC GGAGTGCAGG GCATCGCGGT CGCCGAGCGC GCCTACCAGA AGGCCGTCGC CTATGCGAAG GACCGCGTGC AGAGCCGCCC GGTCGACGGC TCGGTGCGCG GCAGCGCACC GATCATCCAC CACCCCGACG TGCGCCGCAT GCTGATGACG ATGCGGTCGC ACACCGAAGG CTGCCGCGCG ATGGCGATCG TCGCTGCCGC CGCCTACGAC GCGGCGCATG CCCACCCCGA TGCCGAGGTG CGGGCGCAGA ACGAGGCCTT CTACGAATTC ATGGTGCCGC TGGTCAAGGG TTACAGCACC GAGATGAGCG TCGAGGTTGC GAGCCTGGGC GTGCAGGTGC ATGGCGGCAT GGGCTACATC GAGGAGACCG GCGCGGCGCA GTACTACCGC GACGCCAAGA TCCTCACCAT CTACGAAGGC ACCACCGCGA TCCAGGCCAA CGACCTGGTG GGCCGCAAGA CCGCGCGCGA TGGCGGCGGC ACGGCCAAGG CGATCGCGGC CCAGATCGCG CGCACCGAGG CCGAGCTCGC GGCGCGCGAC AGCGTTGCGG CCCGCGCGGT GCTCAAGCGC CTGACGGCCG CGCGCACCGC CTTCGAGCAG GTGGTCGATT TCATCGCCGG CCAGACCAAG GCCAGCCCGA ACGCGGTGTT CGCCGGCAGC GTGCCCTACC TGCTGCTGGC CGGCAGCCTG ATGGCCGGCT GGCAGCTCGC CCGGGCGCTG CTGGTGGCCG AGACGCGCGC CGCGGCCGGC GATGACGTGG CCTTCATGAA CGCCAAGGTG GCCACGGCGC GCTTCTACGC CGAGCACCAG CTGAGCAAGC TGCCCGGCCT GCGCGACAGC ATCGTCGAGG GGGCCGATTC GGTCACCGCG TTGGCGCTGG ACGCGTTCTG A
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Protein sequence | MSYQAPVKDM LFCMQELAAL EEVARLPGFE DAGIDTAQAV LEECAKFNEG VVAPLNWEGD KQPSSWKDGR VTTTPGFKEA FRGFVEGGWQ GLQHSVDFGG QGLPKTIGSA CGEMLNSANL SFALCPLLTD GCIEALLTAG SEAQQQTYIP KMISGQWTGT MNLTEPQAGS DLALVRTRAE PQPDGSFKLF GTKIFITYGE HDMAENIVHL VLARVSGAPE GVKGISLFIV PKFLVKADGS LGERNDVHCV SIEHKLGIKA SPTAVLQYGD HGGAVGYLVG QENRGLEYMF IMMNAARYAV GVQGIAVAER AYQKAVAYAK DRVQSRPVDG SVRGSAPIIH HPDVRRMLMT MRSHTEGCRA MAIVAAAAYD AAHAHPDAEV RAQNEAFYEF MVPLVKGYST EMSVEVASLG VQVHGGMGYI EETGAAQYYR DAKILTIYEG TTAIQANDLV GRKTARDGGG TAKAIAAQIA RTEAELAARD SVAARAVLKR LTAARTAFEQ VVDFIAGQTK ASPNAVFAGS VPYLLLAGSL MAGWQLARAL LVAETRAAAG DDVAFMNAKV ATARFYAEHQ LSKLPGLRDS IVEGADSVTA LALDAF
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