More than 300 homologs were found in PanDaTox collection
for query gene Lcho_2538 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  69.59 
 
 
605 aa  844    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  71.57 
 
 
594 aa  828    Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  70.64 
 
 
594 aa  813    Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  78.36 
 
 
596 aa  947    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  68.56 
 
 
596 aa  836    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  67.79 
 
 
593 aa  798    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  68.23 
 
 
595 aa  796    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  68.39 
 
 
596 aa  809    Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  60.63 
 
 
600 aa  744    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  68.9 
 
 
596 aa  818    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  77.35 
 
 
596 aa  929    Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
596 aa  1219    Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  57.58 
 
 
593 aa  689    Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  68.56 
 
 
596 aa  809    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  72.43 
 
 
594 aa  873    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  77.35 
 
 
596 aa  932    Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  67.41 
 
 
600 aa  790    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  71.98 
 
 
594 aa  877    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  68.56 
 
 
596 aa  836    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  69.06 
 
 
596 aa  823    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  68.56 
 
 
596 aa  836    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  69.06 
 
 
596 aa  823    Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  68.9 
 
 
596 aa  821    Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  78.69 
 
 
596 aa  945    Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  68.23 
 
 
596 aa  835    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  71.24 
 
 
594 aa  828    Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  69.23 
 
 
596 aa  822    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  57.62 
 
 
598 aa  685    Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  76.01 
 
 
596 aa  913    Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  65.6 
 
 
593 aa  770    Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  76.85 
 
 
596 aa  944    Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  69.06 
 
 
596 aa  843    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  68.79 
 
 
595 aa  837    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  67.73 
 
 
595 aa  769    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  68.06 
 
 
596 aa  837    Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  76.51 
 
 
596 aa  914    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  70.97 
 
 
594 aa  858    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  77.05 
 
 
597 aa  893    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  78.69 
 
 
596 aa  945    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  67.89 
 
 
596 aa  813    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  69.06 
 
 
596 aa  823    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  77.18 
 
 
596 aa  945    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  69.06 
 
 
596 aa  823    Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  53.1 
 
 
597 aa  630  1e-179  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  53.45 
 
 
598 aa  627  1e-178  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_008836  BMA10229_A0929  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  75.91 
 
 
367 aa  580  1e-164  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2553  acyl-CoA dehydrogenase domain-containing protein  75.91 
 
 
367 aa  580  1e-164  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  50.17 
 
 
594 aa  575  1.0000000000000001e-163  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  52.67 
 
 
593 aa  574  1.0000000000000001e-162  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  50.25 
 
 
586 aa  567  1e-160  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  50.34 
 
 
594 aa  565  1e-160  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  50.76 
 
 
593 aa  563  1.0000000000000001e-159  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  50.88 
 
 
595 aa  558  1e-157  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.58 
 
 
592 aa  549  1e-155  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  47.36 
 
 
594 aa  541  9.999999999999999e-153  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  47.36 
 
 
592 aa  538  1e-151  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  49.58 
 
 
587 aa  535  1e-151  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
587 aa  536  1e-151  Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  50.42 
 
 
587 aa  532  1e-150  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  47.47 
 
 
593 aa  529  1e-149  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  50.42 
 
 
579 aa  531  1e-149  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  48.23 
 
 
592 aa  530  1e-149  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  46.45 
 
 
593 aa  526  1e-148  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  47.6 
 
 
586 aa  523  1e-147  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  45.72 
 
 
615 aa  519  1e-146  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  47.1 
 
 
594 aa  515  1.0000000000000001e-145  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  48.47 
 
 
596 aa  516  1.0000000000000001e-145  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  47.12 
 
 
593 aa  516  1.0000000000000001e-145  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  46.93 
 
 
592 aa  510  1e-143  Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  46.21 
 
 
593 aa  509  1e-143  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  48.32 
 
 
614 aa  509  1e-143  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  47.36 
 
 
592 aa  507  9.999999999999999e-143  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  46.35 
 
 
597 aa  508  9.999999999999999e-143  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  46.57 
 
 
589 aa  503  1e-141  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  45 
 
 
598 aa  502  1e-141  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  51.48 
 
 
593 aa  503  1e-141  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  47.75 
 
 
592 aa  502  1e-141  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  45.74 
 
 
600 aa  503  1e-141  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  47.8 
 
 
592 aa  501  1e-140  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  44.15 
 
 
596 aa  499  1e-140  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  44.67 
 
 
598 aa  501  1e-140  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_008347  Mmar10_0835  acyl-CoA dehydrogenase domain-containing protein  45.49 
 
 
585 aa  500  1e-140  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00122363 
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  46.99 
 
 
592 aa  500  1e-140  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  46.48 
 
 
592 aa  500  1e-140  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  47.58 
 
 
592 aa  498  1e-139  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  54.76 
 
 
589 aa  498  1e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  46.08 
 
 
595 aa  497  1e-139  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  44.17 
 
 
598 aa  496  1e-139  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  45.2 
 
 
594 aa  494  9.999999999999999e-139  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  45.62 
 
 
593 aa  493  9.999999999999999e-139  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  44.83 
 
 
596 aa  493  9.999999999999999e-139  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_010725  Mpop_3441  acyl-CoA dehydrogenase domain protein  46.58 
 
 
596 aa  493  9.999999999999999e-139  Methylobacterium populi BJ001  Bacteria  normal  0.189286  normal 
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  44.33 
 
 
597 aa  489  1e-137  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3569  acyl-CoA dehydrogenase domain protein  46.01 
 
 
596 aa  489  1e-137  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.452125 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  45.23 
 
 
598 aa  490  1e-137  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  45.32 
 
 
596 aa  490  1e-137  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  44.33 
 
 
597 aa  489  1e-137  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  44.65 
 
 
596 aa  489  1e-137  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  45.85 
 
 
596 aa  491  1e-137  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  44 
 
 
597 aa  489  1e-137  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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