| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3085 |
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| Symbol | |
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| ID | 5710937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3255050 |
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| End bp | 3256765 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269012 |
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| Product | putative acyl-CoA dehydrogenase family protein |
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| Protein accession | YP_001534419 |
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| Protein GI | 159045625 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.195202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTATA CCGCACCGCT GAACGATCTG CGCTTCCTGC TCGACCACGT GGTGGGCTTC
GACGCGGTGC AGGCGACCGA CCGTTTCGCC GAGACCACGC CGGACGTGAC CGAGGCGATC
CTGACCGAGG CCGCCAAGCT CTGCGAGGGG GAGCTTGCCC CGTTGCAGCG CGCGGGCGAT
CTGCACCCTG CGCGCCTGGA GAATGGGGTG GTGCGGACCT CGCCGGGCTT TGCCGAAGGT
TACCGCGCGA TTGCTGCTGG CGGCTGGGTG GGGATGTCGG CTGACCCGGC CTATGGCGGG
ATGGGCCTGC CCATGGCACT GGCCACTTGC ATGAACGAGA TGATGTCCTC GGCCTGCCTT
TCGCTGCAGA TCGCGCCGAT GATGACCCAG GGCCAGATCG AGGCACTGGA GGCCCATGCC
TCCGATGCAC TCAAGGCGCT TTACCTGCCC CGGCTGACCT CCGGCGACTG GGTGGGCACC
ATGAACCTGA CCGAACCGCA GGCGGGTTCG GATGTGGGCG CACTGACCAC GAAGGCGGTG
CCCAAGGGCG ACGGGACCTA CGCGATCACC GGCCAGAAGA TCTATATCAG CTGGGGCGAC
AACGACTTCA CCGGCAATGT CTGCCACCTG GTGCTGGCGC GCCTGCCGGA CGGGGCGCCG
GGGACCAAGG GGATCAGCCT GTTCCTCGTG CCGCGGCACC TGCCCGACGC GGCGGGCAAT
CCGGGGGTGG CCAACGCGCT GAAGGTGGTC AGTCTCGAAC ACAAGCTGGG CCTGCATGGC
AGCCCCACCG CCGTGATGCA GTACGAAGGC GCGACCGGCT GGCTCGTGGG GCCGGAGCAT
GGCGGGATGC GCGCGATGTT CACCATGATG AACAACGCGC GGCTCGGCGT CGGGGTCCAG
GGCATCGGCG TGGCCGAGGC CGCCTACCAG CACGCACTGG CCCATGCCCG CGACCGTAAA
CAGGGCCAGA CCCCGGTTGC CGACGCAGAC AGCATCCTCG CCCATGCGGA TGTGCGCCGG
ATGGTGATGA CCATGCGCGC CGAGGTTTTC GCCGCCCGCG CCATCGCGCT CTCGACCGCG
GTGGCCACCG ACATGCACCA CGCCACCGGG GCGGAAAGCT GGGCTGCCCG CGCCGCCCTG
CTGACCCCGA TCTGCAAGGC CTACGGGACC GACACCGGCA TCCGGGTCGC CGATCTCGGC
CTGCAGGTCC ATGGCGGCAT GGGCGTGATC GAGGAAACCG GGGCCGCGCA ATACCTGCGC
GACGTGCGGG TGACCGCGAT CTACGAGGGC ACCAATGGCA TCCAGGCCAT GGACCTGGTG
GGCCGCAAGC TCGCGGATGG GGGCGAGGCC ATGTCCCGCC TGCTGGACGA GATCGAGGCG
CTGGCAGAAT CCGCGCGCGG GAGCCTGCCG GAACTGGCCG AGCCGGTATG GCAAGCCTGC
GAGACCCTGC GCGAGACGAC CGAGGCGCTG GTGGCCGAGA CCCGGCTCAA TGCCCGCTTC
GGCGGGGCAC AGCCGTACCT GATGGCCGCG GCCCGGGTGC TGGGCGGGCA TGCCCATCTC
GCCGCCGCCA TTGCCGAGGG TGGCCGCGGC CCGCGCAGCG CGCTTGCGCG GTTCTTCGTC
GGGCGGCTTC TGCCCGAACA CGGCGCCCTT GCCGCCCAGG CCCTTGCGGG GGATAAGGAC
CTCTACGCCC TGGACCCGGA AGACCTCGTC GCCTGA
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| Protein sequence | MPYTAPLNDL RFLLDHVVGF DAVQATDRFA ETTPDVTEAI LTEAAKLCEG ELAPLQRAGD
LHPARLENGV VRTSPGFAEG YRAIAAGGWV GMSADPAYGG MGLPMALATC MNEMMSSACL
SLQIAPMMTQ GQIEALEAHA SDALKALYLP RLTSGDWVGT MNLTEPQAGS DVGALTTKAV
PKGDGTYAIT GQKIYISWGD NDFTGNVCHL VLARLPDGAP GTKGISLFLV PRHLPDAAGN
PGVANALKVV SLEHKLGLHG SPTAVMQYEG ATGWLVGPEH GGMRAMFTMM NNARLGVGVQ
GIGVAEAAYQ HALAHARDRK QGQTPVADAD SILAHADVRR MVMTMRAEVF AARAIALSTA
VATDMHHATG AESWAARAAL LTPICKAYGT DTGIRVADLG LQVHGGMGVI EETGAAQYLR
DVRVTAIYEG TNGIQAMDLV GRKLADGGEA MSRLLDEIEA LAESARGSLP ELAEPVWQAC
ETLRETTEAL VAETRLNARF GGAQPYLMAA ARVLGGHAHL AAAIAEGGRG PRSALARFFV
GRLLPEHGAL AAQALAGDKD LYALDPEDLV A
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