127 homologs were found in PanDaTox collection
for query gene Pnec_0569 on replicon NC_010531
Organism: Polynucleobacter necessarius subsp. necessarius STIR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010531  Pnec_0569  binding-protein-dependent transport systems inner membrane component  100 
 
 
139 aa  266  8e-71  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1392  binding-protein-dependent transport systems inner membrane component  77.62 
 
 
231 aa  213  9.999999999999999e-55  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3625  binding-protein-dependent transport systems inner membrane component  52.34 
 
 
231 aa  124  5e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3765  binding-protein-dependent transport systems inner membrane component  53.91 
 
 
241 aa  122  2e-27  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2740  binding-protein-dependent transport systems inner membrane component  48.48 
 
 
232 aa  120  5e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.726638 
 
 
-
 
NC_011662  Tmz1t_2806  binding-protein-dependent transport systems inner membrane component  51.15 
 
 
234 aa  119  1.9999999999999998e-26  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2437  binding-protein-dependent transport systems inner membrane component  49.57 
 
 
230 aa  118  3e-26  Chelativorans sp. BNC1  Bacteria  normal  0.829623  n/a   
 
 
-
 
NC_010725  Mpop_2968  binding-protein-dependent transport systems inner membrane component  50.41 
 
 
231 aa  117  6e-26  Methylobacterium populi BJ001  Bacteria  normal  0.946732  normal 
 
 
-
 
NC_010172  Mext_2850  binding-protein-dependent transport systems inner membrane component  48.78 
 
 
246 aa  116  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.402937  normal 
 
 
-
 
NC_011757  Mchl_3076  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
231 aa  113  1.0000000000000001e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0752148  normal 
 
 
-
 
NC_010511  M446_3942  binding-protein-dependent transport systems inner membrane component  49.65 
 
 
231 aa  112  2.0000000000000002e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0272486 
 
 
-
 
NC_009621  Smed_5503  binding-protein-dependent transport systems inner membrane component  47.5 
 
 
241 aa  109  1.0000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0626  basic organic compound ABC-transporter  42.98 
 
 
228 aa  108  3e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6167  binding-protein-dependent transport systems inner membrane component  47.62 
 
 
230 aa  106  8.000000000000001e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.931122 
 
 
-
 
NC_007908  Rfer_2869  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
260 aa  104  4e-22  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2476  binding-protein-dependent transport systems inner membrane component  43.33 
 
 
242 aa  103  7e-22  Acidovorax ebreus TPSY  Bacteria  normal  0.8915  n/a   
 
 
-
 
NC_008782  Ajs_3129  binding-protein-dependent transport systems inner membrane component  43.33 
 
 
245 aa  103  8e-22  Acidovorax sp. JS42  Bacteria  normal  normal  0.682243 
 
 
-
 
NC_007796  Mhun_0520  binding-protein-dependent transport systems inner membrane component  41.91 
 
 
228 aa  101  3e-21  Methanospirillum hungatei JF-1  Archaea  normal  0.40002  normal  0.449442 
 
 
-
 
NC_010524  Lcho_1813  putative permease component of ABC transporter  47.93 
 
 
238 aa  101  4e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00043828 
 
 
-
 
NC_007517  Gmet_1040  binding-protein dependent transport system inner membrane protein  51.76 
 
 
228 aa  89  2e-17  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000111264  hitchhiker  0.0000000335509 
 
 
-
 
NC_008553  Mthe_1203  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
228 aa  88.6  2e-17  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013223  Dret_2397  binding-protein-dependent transport systems inner membrane component  40.87 
 
 
231 aa  89  2e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1694  binding-protein-dependent transport systems inner membrane component  40 
 
 
232 aa  88.6  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.754071  n/a   
 
 
-
 
NC_009051  Memar_1878  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
231 aa  87.8  4e-17  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_012918  GM21_2527  binding-protein-dependent transport systems inner membrane component  39.23 
 
 
232 aa  86.3  1e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00176301 
 
 
-
 
NC_007948  Bpro_1758  binding-protein-dependent transport systems inner membrane component  45.61 
 
 
257 aa  84.3  5e-16  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_007498  Pcar_0928  ABC-type transport system, permease subunit  47.73 
 
 
228 aa  82.8  0.000000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1588  binding-protein-dependent transport systems inner membrane component  45.9 
 
 
251 aa  81.6  0.000000000000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0466  hypothetical protein  45.98 
 
 
235 aa  81.3  0.000000000000004  Methanocorpusculum labreanum Z  Archaea  normal  0.700584  normal 
 
 
-
 
NC_010718  Nther_2285  binding-protein-dependent transport systems inner membrane component  41.18 
 
 
229 aa  81.3  0.000000000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.000107267  normal 
 
 
-
 
NC_008554  Sfum_0028  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
230 aa  80.5  0.000000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000259316  normal  0.154621 
 
 
-
 
NC_013173  Dbac_3403  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
229 aa  80.5  0.000000000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.669819  n/a   
 
 
-
 
NC_009051  Memar_1893  binding-protein-dependent transport systems inner membrane component  37.98 
 
 
233 aa  80.5  0.000000000000008  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007644  Moth_0068  binding-protein dependent transport system inner membrane protein  34.33 
 
 
245 aa  80.1  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0463742  normal  0.217149 
 
 
-
 
NC_011832  Mpal_2303  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
231 aa  80.1  0.00000000000001  Methanosphaerula palustris E1-9c  Archaea  normal  0.105994  normal  0.374369 
 
 
-
 
NC_009901  Spea_4095  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
235 aa  78.6  0.00000000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2701  ABC transporter, permease protein  50.51 
 
 
228 aa  78.6  0.00000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0123  ABC transporter, permease protein  42.71 
 
 
235 aa  78.6  0.00000000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.749352 
 
 
-
 
NC_009802  CCC13826_0203  ABC transporter, permease protein  31.88 
 
 
230 aa  78.6  0.00000000000003  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0328  binding-protein-dependent transport systems inner membrane component  38.78 
 
 
234 aa  78.6  0.00000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00042229  normal  0.158089 
 
 
-
 
NC_013165  Shel_27150  ABC-type tungstate transport system, periplasmic component  41.05 
 
 
248 aa  78.2  0.00000000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.544705  normal 
 
 
-
 
NC_013924  Nmag_3966  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
238 aa  77.8  0.00000000000005  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008345  Sfri_3918  binding-protein-dependent transport systems inner membrane component  39.64 
 
 
235 aa  76.6  0.0000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0186248  n/a   
 
 
-
 
NC_009438  Sputcn32_3880  binding-protein-dependent transport systems inner membrane component  41.9 
 
 
235 aa  76.6  0.0000000000001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1777  binding-protein-dependent transport systems inner membrane component  40.62 
 
 
231 aa  75.5  0.0000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.753761  n/a   
 
 
-
 
NC_007519  Dde_0233  ABC transporter, permease protein  37.5 
 
 
232 aa  73.9  0.0000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3543  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
232 aa  73.6  0.0000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  0.0152138  n/a   
 
 
-
 
NC_008346  Swol_1632  sulfate/tungstate ABC transporter permease  50.52 
 
 
225 aa  73.2  0.000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1794  binding-protein-dependent transport systems inner membrane component  42.48 
 
 
218 aa  73.2  0.000000000001  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1131  ABC transporter, permease protein  38.61 
 
 
232 aa  73.2  0.000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2918  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
232 aa  72.4  0.000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_02263  hypothetical protein  38.61 
 
 
232 aa  72  0.000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012029  Hlac_2056  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
238 aa  71.6  0.000000000003  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.202188  normal  0.0740354 
 
 
-
 
NC_008787  CJJ81176_1524  tungstate ABC transporter, permease protein, putative  32.86 
 
 
228 aa  71.2  0.000000000004  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1891  putative tungstate ABC transporter, permease protein  32.86 
 
 
228 aa  71.2  0.000000000005  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1710  tungstate ABC transporter, permease protein, putative  32.86 
 
 
228 aa  70.9  0.000000000006  Campylobacter jejuni RM1221  Bacteria  normal  0.506083  n/a   
 
 
-
 
NC_009635  Maeo_0472  binding-protein-dependent transport systems inner membrane component  36.22 
 
 
234 aa  70.9  0.000000000006  Methanococcus aeolicus Nankai-3  Archaea  normal  0.183215  n/a   
 
 
-
 
NC_010506  Swoo_0086  binding-protein-dependent transport systems inner membrane component  39 
 
 
235 aa  69.7  0.00000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3968  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
235 aa  68.9  0.00000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0123  binding-protein-dependent transport systems inner membrane component  38 
 
 
235 aa  68.9  0.00000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1387  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
232 aa  68.9  0.00000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2781  binding-protein-dependent transport systems inner membrane component  41.46 
 
 
231 aa  68.9  0.00000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013743  Htur_2295  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
238 aa  68.6  0.00000000003  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008781  Pnap_1509  binding-protein-dependent transport systems inner membrane component  43.86 
 
 
254 aa  68.6  0.00000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003505  ABC-type tungstate transport system permease protein  36.63 
 
 
232 aa  68.2  0.00000000004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1722  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
239 aa  67.8  0.00000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_4720  ABC transporter, permease protein  44.59 
 
 
235 aa  67.8  0.00000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_1649  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
231 aa  67.4  0.00000000006  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3875  binding-protein-dependent transport systems inner membrane component  43.24 
 
 
235 aa  67.4  0.00000000007  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_012030  Hlac_3453  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
238 aa  67  0.00000000008  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_4078  binding-protein-dependent transport systems inner membrane component  43.24 
 
 
235 aa  67  0.00000000008  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0081  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
235 aa  67  0.00000000009  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4318  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
235 aa  67  0.00000000009  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4458  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
235 aa  67  0.00000000009  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4263  binding-protein-dependent transport systems inner membrane component  44.59 
 
 
235 aa  67  0.00000000009  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3684  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
235 aa  65.5  0.0000000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2083  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
235 aa  62.8  0.000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0891  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
232 aa  61.6  0.000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.819313  n/a   
 
 
-
 
NC_012034  Athe_0825  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
210 aa  60.5  0.000000008  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00592133  n/a   
 
 
-
 
NC_013517  Sterm_1681  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
209 aa  60.5  0.000000008  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2224  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
231 aa  59.7  0.00000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal 
 
 
-
 
NC_008825  Mpe_A2223  putative permease component of ABC transporter  53.01 
 
 
252 aa  58.9  0.00000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1736  NifC-like ABC-type porter  36.36 
 
 
270 aa  56.6  0.0000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2270  binding-protein-dependent transport systems inner membrane component  38.53 
 
 
232 aa  56.6  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2866  binding-protein-dependent transport systems inner membrane component  42 
 
 
235 aa  56.2  0.0000001  Ralstonia pickettii 12J  Bacteria  normal  0.370655  normal 
 
 
-
 
NC_007347  Reut_A2781  binding-protein dependent transport system inner membrane protein  37.62 
 
 
232 aa  55.8  0.0000002  Ralstonia eutropha JMP134  Bacteria  normal  0.24732  n/a   
 
 
-
 
NC_012856  Rpic12D_2460  binding-protein-dependent transport systems inner membrane component  42 
 
 
235 aa  54.7  0.0000004  Ralstonia pickettii 12D  Bacteria  normal  0.455343  normal  0.828531 
 
 
-
 
NC_010424  Daud_1541  binding-protein-dependent transport systems inner membrane component  38.94 
 
 
217 aa  52.8  0.000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0915654  n/a   
 
 
-
 
NC_009943  Dole_2630  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
229 aa  52.8  0.000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4039  binding-protein dependent transport system inner membrane protein  39.09 
 
 
250 aa  50.4  0.000008  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.564931 
 
 
-
 
NC_010525  Tneu_0965  binding-protein-dependent transport systems inner membrane component  40.66 
 
 
214 aa  49.3  0.00002  Thermoproteus neutrophilus V24Sta  Archaea  normal  hitchhiker  0.00460897 
 
 
-
 
NC_008701  Pisl_0047  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
214 aa  48.9  0.00003  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_003295  RSc2631  transmembrane ABC transporter protein  39.19 
 
 
235 aa  48.1  0.00004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0364359  normal  0.493142 
 
 
-
 
NC_007973  Rmet_1376  sulfate ABC transporter permease protein CysT  28 
 
 
282 aa  46.6  0.0001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_1618  NifC-like ABC-type porter  30.6 
 
 
266 aa  46.6  0.0001  Methanococcus vannielii SB  Archaea  normal  0.156172  n/a   
 
 
-
 
NC_007333  Tfu_0327  molybdate ABC transporter, inner membrane subunit  28.43 
 
 
273 aa  43.9  0.0007  Thermobifida fusca YX  Bacteria  normal  0.0249986  n/a   
 
 
-
 
NC_007777  Francci3_3985  molybdate ABC transporter permease  26.77 
 
 
338 aa  43.9  0.0008  Frankia sp. CcI3  Bacteria  normal  0.108268  normal 
 
 
-
 
NC_009635  Maeo_1424  binding-protein-dependent transport systems inner membrane component  25 
 
 
213 aa  43.1  0.001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.139435  n/a   
 
 
-
 
NC_004347  SO_4653  sulfate ABC transporter, permease protein  25.41 
 
 
293 aa  42.4  0.002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_2558  molybdate ABC transporter, inner membrane subunit  33.66 
 
 
293 aa  42.7  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.000169531  normal  0.108126 
 
 
-
 
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