| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3129 |
|---|
| Symbol | |
|---|
| ID | 4673984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3303799 |
|---|
| End bp | 3304536 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639840170 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_987330 |
|---|
| Protein GI | 121595434 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.682243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACAA TGACCCAGAG CGTCGCCACG GCGCTGCACC TCATCACCTC CGCCGATGCC
GCCTTGTGGA CCATCGTCGT GCGTTCGCTC GCCGTGAGTG CCACGGCCTG CCTGCTCGCC
TGCGGCGCGG GCGTGGTGCT GGGGGCATGG CTGGGCGTGG CGCGCTTTGC CGGGCGCGAC
GCGGTGCTCG CGGTGCTCAA TACCCTGCTG GCCGTGCCCT CGGTGGTGGT GGGCCTGGGC
GTGTACCTGC TGCTGTCGCG CACCGGCCCG CTGGGCAGCC TGGGCTGGCT GTTTTCTTTC
AAGGCGATGG TGCTGGCGCA GGCGCTGCTG GTGTTGCCCG TGGTCACCGC GCTTACGCGC
CAGGTGGTCG AGGACGTGGA CCGCCTGCAT GGCGAGCAGT TGCGCTCGCT GGGCGCCGGC
ACCCTGTTGC GTGCCCTGTT GGTGGCCTGG GACGAGCGCT ATGCGCTGCT CACGGTGCTG
ATCGCCGCAT TCGGCCGCGC CATCTCGGAG GTGGGCGCGG TGATGATCGT GGGCGGCAAC
ATCGACGGCT TCACGCGCGT CATGACCACC GCCATCGCGC TGGAGACCAG CAAGGGCGAC
CTGCCGCTGG CGCTGGCGCT GGGCCTCGTG CTGCTGGGCG TCGTGTTGTT GCTCAACGTG
GGCATTGCGC TGCTGCGCCG CTGGCGTGAA CGCGTGGATG GTGCCGCCGT GGGCGGCCTG
GCCGGGGTGG GGGCATGA
|
|---|
| Protein sequence | MSTMTQSVAT ALHLITSADA ALWTIVVRSL AVSATACLLA CGAGVVLGAW LGVARFAGRD
AVLAVLNTLL AVPSVVVGLG VYLLLSRTGP LGSLGWLFSF KAMVLAQALL VLPVVTALTR
QVVEDVDRLH GEQLRSLGAG TLLRALLVAW DERYALLTVL IAAFGRAISE VGAVMIVGGN
IDGFTRVMTT AIALETSKGD LPLALALGLV LLGVVLLLNV GIALLRRWRE RVDGAAVGGL
AGVGA
|
|---|
| |