| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2303 |
|---|
| Symbol | |
|---|
| ID | 7270564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2451377 |
|---|
| End bp | 2452072 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643570908 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002467311 |
|---|
| Protein GI | 219852879 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.105994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.374369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGA TCATAGACGG CATCGTCCAG GCAGGGGGGC TGATCCTCAC CCTGAACCCA
GACGTGATGG AGATAACCGG GCTGACCATC TCCATCTCGA TCGTGGCCAC GTTGATCGGG
GCGGTGATCG CCGTTCCGCT TGGTGGCGTG ATCGCCACGA ACACCTTTTT TGGAAAGCGG
GCCTTGATGC AGGTGATCCA GACACTGTAC GCCGTACCGA CCGTTACCAT CGGGCTCCTC
CTCTTCCTGC TCATCTCCCG GGCCGGCCCC CTGGGTCAGT TCAGGCTTCT CTTCACCCCT
ACCGGCATGG TGGTCGGGGA CGTGCTGCTG ATCCTCCCGA TCGTCACCGG GATGACACTC
TCAGCCCTCG CCAACGTGGA CCGCGGAGTC CATGAGACCC TCGTCTCCCT CGGCGCGACC
AGGCAACAAC TCCTCTGGAT GGTGATGAAG GAGGCACGAT TTGCCATCAT GGCCGCCATC
GCCCTCGGGT TCGGGCGAGC TATCTCCGAG GTTGGATGTG CCATCATGAT CGGTGGCAAC
ATCAGAGGAT CAACCAGGGT GCTGACGACT GCGATCAGCC TGGAGACCTC AATGGGGAAC
ATCGGATTCT CGATCGCCCT GGGTGTGATC CTGCTGTTGA TAGCGCTTGC CGTCAACCTC
TTTGTCTCAT ATCTGCAGGG GGAGGGAAGC CTATGA
|
|---|
| Protein sequence | MQEIIDGIVQ AGGLILTLNP DVMEITGLTI SISIVATLIG AVIAVPLGGV IATNTFFGKR
ALMQVIQTLY AVPTVTIGLL LFLLISRAGP LGQFRLLFTP TGMVVGDVLL ILPIVTGMTL
SALANVDRGV HETLVSLGAT RQQLLWMVMK EARFAIMAAI ALGFGRAISE VGCAIMIGGN
IRGSTRVLTT AISLETSMGN IGFSIALGVI LLLIALAVNL FVSYLQGEGS L
|
|---|
| |