Gene Pnap_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1509 
Symbol 
ID4688845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1598756 
End bp1599520 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID639834512 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_981744 
Protein GI121604415 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT TCTCAAGCAG CGCCATCACG GCTTTTTCGC TGATCACCTC GCTCGACCCC 
TTGCTGGCCG GCATCGTCGT GCGGTCGCTG GCCGTCAGCG CCCTGGCCTG CGTGATTGCC
TGCAGCGCCG GGCTGCTTGC CGGCGCCTGG CTGGGCGTGG CGCGCTTTCG GGGCCGCGCC
GTCGTGCTGG CCCTGCTCAA TACCGCGCTG GCGCTGCCTT CGGTGGTGGT CGGGCTGGTG
GTGTATTTGC TGCTGTCGCG CACCGGGCCG CTGGGTTTTC TGGGCTGGCT GTTTTCCTTC
AAGGCGATGG TGCTGGCGCA AAGCGTGCTG GTGCTCCCAG TGGTCACCGC GCTGGTGCGC
CAGAGCATTG ACGACGCCGA CCGCAGCCAC GGCGAGCAGT TCGAGTCGCT GGGCGCGCGC
CGTTTCATGC GCGGCCTGAT CCTGCTGTGG GACGAGCGCT ATGCCTTGCT GACGGTGCTG
ATGGCCGCCT TTGGCCGTGC CATTTCGGAG GTCGGCGCGG TGATGATCGT GGGCGGCAAC
ATCGAAGGCT TTACGCGCGT CATGACGACT TCGATTGCGC TGGAAACCAG CAAGGGCGAC
CTGCCGCTGG CGCTGGCGCT GGGCCTTGTG CTGCTGGGCG TGGTGCTGCT GCTCAATCTA
TTGATCGCGC TGGTGCGGCG CTGGCGCGAA CGGCTTGACG ACCCGCTGCC CGATGTGGAG
GCCGTCCTGG TCGCAACCCC GGTTGCCGGG CGTGCATCGC CATGA
 
Protein sequence
MNTFSSSAIT AFSLITSLDP LLAGIVVRSL AVSALACVIA CSAGLLAGAW LGVARFRGRA 
VVLALLNTAL ALPSVVVGLV VYLLLSRTGP LGFLGWLFSF KAMVLAQSVL VLPVVTALVR
QSIDDADRSH GEQFESLGAR RFMRGLILLW DERYALLTVL MAAFGRAISE VGAVMIVGGN
IEGFTRVMTT SIALETSKGD LPLALALGLV LLGVVLLLNL LIALVRRWRE RLDDPLPDVE
AVLVATPVAG RASP