| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1813 |
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| Symbol | |
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| ID | 6161375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1960734 |
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| End bp | 1961450 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664575 |
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| Product | putative permease component of ABC transporter |
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| Protein accession | YP_001790845 |
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| Protein GI | 171058496 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00043828 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACGG TGGCCGCCAG CCTCGGCCTG GCCGTCGATC TGATTTCCAG TGGCGATGCC
GACGTGCTGC GCATCGTCGG CCTGTCGCTG CGGGTCAGCG GCGCGGCCTG TCTGACGGGC
GCGCTGTCCG GGCTGTGGCT CGGGGCGTGG CTGGCGGTGG CGCGGTTTCC GGGCCACGGC
CTGGCGGTCT GGCTGCTCAA CACGCTGCTG GCGCTGCCGT CGGTGGTGGT CGGCCTGATG
GTCTACCTGC TGCTGTCGCG CTCGGGGCCG CTGGGGTCGT GGGGCATCCT GTTCACGCCC
ACCGCGATGG TGATCGCGCA GAGCATCCTG GTGGTGCCGC TGATCGCCGC GCTGACCCGC
CGCCTCGTCA TCGACGGCCT GGCCGATGGC GGCGACCAGC TGCGCTCGAT GGGCGCCGGC
CCCTTGCTGT CGGCGCTGCT GGTGCTGGTA CACGAGCGGC TGGCGGTGCT GACGATCCTG
CTCACGGCGT TTGGCCGTGC GGTCGCCGAG GTCGGCGCGG TGATGATCGT GGGCGGCAAC
ATCGACGGCT TCACCCGCGT GATGACCACC GCCATCGCGC TCGAGACCAG CAAGGGCGAC
CTGCCGCTGG CGCTGGCGCT GGGCCTGCTG CTGCTGGGTG TGGTCGGCGT CATCAACCTG
CTGATCGGCT GGATGCAGCC GCGCGGCGCC GCGGCGCCGG GACAGGGGCT GATGTGA
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| Protein sequence | MSTVAASLGL AVDLISSGDA DVLRIVGLSL RVSGAACLTG ALSGLWLGAW LAVARFPGHG
LAVWLLNTLL ALPSVVVGLM VYLLLSRSGP LGSWGILFTP TAMVIAQSIL VVPLIAALTR
RLVIDGLADG GDQLRSMGAG PLLSALLVLV HERLAVLTIL LTAFGRAVAE VGAVMIVGGN
IDGFTRVMTT AIALETSKGD LPLALALGLL LLGVVGVINL LIGWMQPRGA AAPGQGLM
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