Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2631 |
Symbol | |
ID | 1221478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2833456 |
End bp | 2834163 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239032 |
Product | transmembrane ABC transporter protein |
Protein accession | NP_520752 |
Protein GI | 17547350 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0364359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.493142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCT GGTCGGCCAC CGTCGAGGCG TTCGCCCTGC TCACCCGCGG CGACGCGGCG CTCTGGGTGA TCGTCTGGAC CTCGCTGAAG GTGGCGCTGG CCGGCCTGCT GCTGGCCGCG CCGCCGGCGC TGCTGCTGGC CTACGCCATC GCCATGCACC GCTTCCCCGG ACGCCGGGCG CTGGTCGTGC TGGCGCAGGC CTCGCTGTCG TTTCCGACCG TGCTGATCGG ACTGGTGCTC TACCTGCTGC TGTCGCGCCA GGGGCCGCTG GGCGGCTTCG GGCTGCTGTT CACGCAAGGG GGCATGATCC TCGGCCAGGC GGTGCTCGGC CTGCCGGTGA TCATAGCGTT CGCGTTGGCC ACCTTCGAGC GCGCCGACCC GCGCCTGGCG GAGACCGCCC GCGTGCTCGG CGCCGGCCCG GTGCGGCTGC TGTTCACAGT GTTCCGCGAA CTGCGCTTCG GCCTGGGCGC CGCCGTGGTG GCGGGCTTCG GCCGGGTGAT CGCCGAGGTC GGATCGGCGC TGATGGTCGG CGGCAACATC GAGGGCGTCA CGCGCACCAT GACCACCGCG ATTGCGCTGG AGACCAGCAA GGGCGAGTTC GCCCAGGGCA TTGCGCTGGG CATCGTGCTG ATCGCGCTGG CGCTGCTGGT CAACCTGGTG CTGGCGTGGC TGCAGGGCGC CGGCGCCTTC CGCCGCCACA CCGCATGA
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Protein sequence | MDIWSATVEA FALLTRGDAA LWVIVWTSLK VALAGLLLAA PPALLLAYAI AMHRFPGRRA LVVLAQASLS FPTVLIGLVL YLLLSRQGPL GGFGLLFTQG GMILGQAVLG LPVIIAFALA TFERADPRLA ETARVLGAGP VRLLFTVFRE LRFGLGAAVV AGFGRVIAEV GSALMVGGNI EGVTRTMTTA IALETSKGEF AQGIALGIVL IALALLVNLV LAWLQGAGAF RRHTA
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