Gene Memar_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1893 
Symbol 
ID4845917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1887812 
End bp1888513 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID640116599 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001047801 
Protein GI126179836 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAGA TCATCGAGGG ATTTCTGGAG GCGATCCGGC TCATCGTCAC GCTTGATCCC 
GACGTGATGG CCATCGCCGC GCGAAGCGTC GTCATATCGC TCACCGCAAC GATCATCGCC
ACGCTGTTCG CCGTCCCGCT CGGGGCCGCG ATCAACTTCG GGTCGTTCCC GGGCAGAAAG
AGCCTCATCA ACCTGATCCA GACGCTCTAC TCCCTCCCGA CGGTCATCGT CGGGCTGCTG
ATATTCCTGT TCATCTCCCG CGTCGGGCCG TTCGGGTTCC TGCGGCTGCT CTTCACCCCG
ACCGCGATGA TCATCGCGCA GACGGTGCTC ATCCTGCCGA TCATGACCGG CCTCACGATC
TCCGCGCTCT CGGGGGTCGA CCCGGTCCTC AGTGACACCC TCCGTTCACT CGGGGCAACA
AGGCTCCAGT TCCTGACAAA CATCTTGAAA GAAGCCCGGT TCGCGATCCT TGCGACCGTC
GCGGTCGGGT TCGGGCGGGC GATATCCGAA GTCGGGGCGG CGATCCTGGT CGGCGGCAAC
ATCGCGGCGT CGTCGTTCGC GAGTTCGACC CGGGTGCTGA CGACCGCGAT ATCGCTCGAG
ACCTCGATGG GCAACATCTC CCGGTCCATC GCGCTCGGGA TCGTCCTCCT TGCAATCGCC
CTCGGCGTGA ATCTCGCCAT AACCACGGTG CAGCACCGGT GA
 
Protein sequence
MYEIIEGFLE AIRLIVTLDP DVMAIAARSV VISLTATIIA TLFAVPLGAA INFGSFPGRK 
SLINLIQTLY SLPTVIVGLL IFLFISRVGP FGFLRLLFTP TAMIIAQTVL ILPIMTGLTI
SALSGVDPVL SDTLRSLGAT RLQFLTNILK EARFAILATV AVGFGRAISE VGAAILVGGN
IAASSFASST RVLTTAISLE TSMGNISRSI ALGIVLLAIA LGVNLAITTV QHR