Gene Francci3_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3985 
Symbol 
ID3906945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4768086 
End bp4769102 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content74% 
IMG OID637881313 
Productmolybdate ABC transporter permease 
Protein accessionYP_483064 
Protein GI86742664 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter
[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACCC GCGGCGGTTC GCTCCTTCGA GGGGGTCAGC CGGAGCAACG GGCCGTCGGC 
CCGCACGGCC GGTTCGGCCC GCGCGGCCGG TTCGGCCCGC GCGATCGGGC ACCCCGGCCG
GGTGACCCGC GGACCGGCGG ACATCCACGC CGCACGGTTC GCCGGGAAAC GCGCCGCCGG
ATGTCCTGGG CGCTGCTGGT GCCGGCCGGG ATCGCTGGCC TGTTCCTGCT CCTGCCGCTC
GTCGGCCTGC TCGTCCGCGC TCCCTGGTCC GCCCTGCCCG ATCTGCTCAC CGAGATCGCG
GTCCGGCAGG CCCTCCTCCT GTCGGTGGAG ACGGCCACCG CCACGACCGT GCTGTCGCTG
CTGTTCGGTG TCCCCCTGGC CTGGCTGCTG GCCCGCACGC GTTTTCCCGG CCGGTCTCTG
CTGCGCGCCC TGGTCACCCT CCCGCTCGTG CTGCCGCCAG TGGTCGGCGG CGTGGCCCTA
CTTCTGGTAC TGGGTCGGCG CGGCATCGTC GGCCAGTACC TCGATGGCTG GTTCGGCATC
ACCATCCCGT TCACCAGCGT CGGCGTGGTG ATCGCGCAGA CCTTCGTGGC CATGCCGTTC
CTCGTCGTGT CCGTCGAGGG CGCGCTGAAC AGCGCCGATC GGCGGTTCGA GGACGCCGCC
GCCACCCTCG GCGCCGGGCC GTGGATGACG TTTCGCCGAG TCACCATGCC GATGACGGCG
CCGGCGGTGG CCGCCGGCGC GGCGCTGTGC TGGGCCCGCG CCCTCGGCGA GTTCGGGGCC
ACGATCACGT TCGCCGGCAA CTTCCCCGGG ACCACCCGGA CCACGCCGCT CGCGGTCTAC
CTGGCGCTGG AGACGGACTC GGACACCGCC ATCGCGCTGT CACTCGTACT GCTCGCGGTC
TGCGTCGGGG TTCTGGTGGC GCTGCGGGGC CGGTGGTTCC CCGGCACCCG GCGAATTTTA
CGCAACCGGG GAACGCGTGA CGGCGCCCCC GATGCGCTCG AGCGGAGCAT CCCGTGA
 
Protein sequence
MSTRGGSLLR GGQPEQRAVG PHGRFGPRGR FGPRDRAPRP GDPRTGGHPR RTVRRETRRR 
MSWALLVPAG IAGLFLLLPL VGLLVRAPWS ALPDLLTEIA VRQALLLSVE TATATTVLSL
LFGVPLAWLL ARTRFPGRSL LRALVTLPLV LPPVVGGVAL LLVLGRRGIV GQYLDGWFGI
TIPFTSVGVV IAQTFVAMPF LVVSVEGALN SADRRFEDAA ATLGAGPWMT FRRVTMPMTA
PAVAAGAALC WARALGEFGA TITFAGNFPG TTRTTPLAVY LALETDSDTA IALSLVLLAV
CVGVLVALRG RWFPGTRRIL RNRGTRDGAP DALERSIP