| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1588 |
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| Symbol | |
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| ID | 7974817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1718310 |
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| End bp | 1719065 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792188 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943505 |
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| Protein GI | 239814595 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACACCT TTGCACAGAG CGCCGTCGCG GCCTGGCAAC TGCTCGTGTC CGGCGATCCG
GTGCTGCTGG CCATCGTCGG ACGCTCGCTC GCGGTCAGCG CGAGCGCCTG CGTGCTGGCC
TGCGGCCTGG GCCTGCTGCT GGGCGCCTGG CTGGGCGTGG CGCGCTTTCG CGGCCGCGCC
GGCTTGCTCA CGCTGCTGAA CACGCTGCTG GCACTGCCGT CGGTGGTGGT GGGGCTGGTC
ATCTACCTGC TGCTGTCGCG CTCGGGCCCG CTCGGCTTCC TGGGCTGGCT GTTTTCGTTC
AAGGCCATGG TGCTGGCGCA GACGGTGCTG GTGCTGCCGG TGGTGACGGC GCTCACGCGC
CAGGCCATCG AGGACGCCGA GCGTGCGCAT GGCGAGCAGC TGAGCTCGCT CGGCGCGGGG
CCTCTGGCGC GCGCGCTGCT GCTGGTGTGG GACGAGCGCT ATGCGCTGCT CACGGTGCTG
ATCGCCGCGT TCGGACGCGC GGTATCGGAG GTGGGCGCGG TGATGGTGGT GGGCGGCAAC
ATCGACGGCT TCACGCGCGT GATGACCACC GCCATCGCGC TCGAAACCAG CAAGGGCGAC
CTGCCGCTGG CGCTGGCCCT GGGCATCGTG CTGCTGGGCG TGGTGCTGGT GCTCAATCTT
GCGATTGCCG CCGTGCGGGG CTGGCGCGAG CGGGTCGACG GCGGCGGCGG CGCAGGCGGC
ATGGCGGCCT GGTGGCGGCC GGAGGCGCGC CCGTGA
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| Protein sequence | MNTFAQSAVA AWQLLVSGDP VLLAIVGRSL AVSASACVLA CGLGLLLGAW LGVARFRGRA
GLLTLLNTLL ALPSVVVGLV IYLLLSRSGP LGFLGWLFSF KAMVLAQTVL VLPVVTALTR
QAIEDAERAH GEQLSSLGAG PLARALLLVW DERYALLTVL IAAFGRAVSE VGAVMVVGGN
IDGFTRVMTT AIALETSKGD LPLALALGIV LLGVVLVLNL AIAAVRGWRE RVDGGGGAGG
MAAWWRPEAR P
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