Gene Ddes_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1777 
Symbol 
ID7285490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2147177 
End bp2147872 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID643582597 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002480352 
Protein GI220905040 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.753761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATC TTGTCAACGG CATTTCCGGC GCATTTTCCC TCTTGATCCA CATGGATGAG 
GTCACCCTTT CCGCCGTGCG CGCCACGCTG CTTTCCACCT GCTATGCCAT GGCCGCCTCT
CTGCTGCTGG GGCTGCCGCT GGGCTTTATA CTCGGGTATT GCGCCTTTCC CGGTAAAAGG
GCGTTGCGCC TTGTTTCCGA CACGCTTCTG GCTTTTCCCA CGGTTCTTAT CGGCCTGCTG
GTTTATGCTC TCATAACGGC GCGTGGTCCC CTCGGACAGT ATGGCCTGCT GTTTACCCTG
CCGGGAATGG CCGTGGGCCA GGCCCTTCTG GCCCTGCCCA TTGTGGTCTC ATGGACCGCG
CAGGCTGTGG AAAGTCTGGA CCCGCGCTGC CGCGACACCC TGTTGACCCT TGGGGCCAAT
ACCCGGCAAA TGGCGGTGTT TTCGCTGTGG GAATGCCGTT ACTCCATTGG CATGGTCTGC
ATCACGGCTT TTGGGCGCGT TATTACCGAG GTGGGCGTGG CCATGATGCT CGGCGGCAAT
ATCCGCTATG CCACCCGAAC CATGACCACA GCCATAGCGC TGGAGACCAG CAAGGGAGAC
TTTGCCCAAG GCATAGCTCT GGGGCTTGTC CTGCTGCTCA TGGCTTTTGT CATCAATCTG
GCGTTGGCCT TTTTCAGGCA CAGGGGGCGC GCGTGA
 
Protein sequence
MDYLVNGISG AFSLLIHMDE VTLSAVRATL LSTCYAMAAS LLLGLPLGFI LGYCAFPGKR 
ALRLVSDTLL AFPTVLIGLL VYALITARGP LGQYGLLFTL PGMAVGQALL ALPIVVSWTA
QAVESLDPRC RDTLLTLGAN TRQMAVFSLW ECRYSIGMVC ITAFGRVITE VGVAMMLGGN
IRYATRTMTT AIALETSKGD FAQGIALGLV LLLMAFVINL ALAFFRHRGR A