Gene Tpen_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1794 
Symbol 
ID4601917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp1735337 
End bp1735993 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID639774567 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_921192 
Protein GI119720697 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCAG GAGAGCTTGC CCAGATAACG TTGCTATCGC TGAGAGTCTC TCTAACCGCA 
GTCTCGCTGT CGACGCTGGT AGGGGTTTTC CTCGGGTCCC TCATAGCCAC GTCCTCCTCT 
AAGTACAAGA ACGCGCTCGT AACGCTCGTC AACACGTTCA TGGGGACTCC GCCTGTACTC 
CTGGGGCTAG TGCTCTACCT ACTGCTCTCA AGGTCGGGGC CGCTGGGGTT CCTCGGGATG 
CTCTTCACCC CGGAGGCCAT GGTACTAGCC CAGTTCCTGC TAACCCTCCC GATAATAACG 
GGGTTAACGA TATCGGCTGT GGAGTCCCTT CCCAGCGAGC TCCGCGAGTT CGTGAAGTCC 
ATCTCGCCGT CGAGGCTACA CGAGTCGGTG CTCCTACTGA ACGAGTCGAG GATAGGCGTG 
TTCGGAGCAG TGCTGGCTGC GCTGGCCCGC GCGGTGTCCG AGGTTGGAGC GGTGATAATA 
GTCGGCGGGA ACATAAGGTA CTACACAAGG GTGCTCACAA CGGCTATAGT GTACTACACG 
AACACGGGAG AGTTCGAAAC CTCGCTCTGG CTGGGAGCCA CGCTTACAGC AATATACCTC 
GCGATAAACG TCGTGCTGGT GTACGTGAGG ACCAGGCTGG GTGCCCGGAG TGATTAG
 
Protein sequence
MDAGELAQIT LLSLRVSLTA VSLSTLVGVF LGSLIATSSS KYKNALVTLV NTFMGTPPVL 
LGLVLYLLLS RSGPLGFLGM LFTPEAMVLA QFLLTLPIIT GLTISAVESL PSELREFVKS 
ISPSRLHESV LLLNESRIGV FGAVLAALAR AVSEVGAVII VGGNIRYYTR VLTTAIVYYT 
NTGEFETSLW LGATLTAIYL AINVVLVYVR TRLGARSD