Gene Ava_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4039 
Symbol 
ID3682168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5024290 
End bp5025042 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content44% 
IMG OID637719391 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_324539 
Protein GI75910243 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.564931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGGTTA GGTTAGAGAG GACATCACGT TTATTTTCGA TTCATAAGAA ACTCGTGGAT 
ACAATCATTG ATGGAGCGAA TAAGGCTCTA GAGTTATTAA TTAGTGGCGA TCGCGATGTT
ATCGAGGTAA TGACGATGAC ATTGCTAGTC TCTGGAGTGG CGACAACTAT TAGTGTGTTG
TTGGGTGTAC CTTTGGGTTT GTGGTTGGCT TTAGAAGATT TCATCGGGAA ACCTGTATTG
AACAGCGTCG TTAACTTCGG AATGGGATTA CCGCCTGTGG TGGTTGGCTT GGTGGTGAGT
CTATTTTTGT GGCGTTCTGG CCCTTTGGGT GACTTGGATT TAATGTACAC AACCACAGCC
ATGATTATCG CTCAAACTAT TATTGCTTTC CCGATAGTTG CGGGTTTTAG TTTTGCTGCC
ATCCTCAGTA TTAATCCGAA ACTACGTTGG CAATTATTAT CAATGGGGGC GACACCTTGG
CAAGCTCATT GGTTATTAAT TAAGGAAGCA CGATTAGGCT TGATAGCTGC CATTATTGCG
GGTTTTGGTC GCGTCATTTC GGAAGTTGGC GCATCGATGA TGGTGGGGGG AAATATCAAA
GGACAGACGC GAGTTTTAAC TACAGCTATT GTCACAGAAG TAGAAAAAGG TAACTTTGAG
GTGGCGATGG CGATCGCGTA CATTCTCCTG TTCATCACCT ACAGCATTGT GGTGTCGCTG
ACTATCTTGC AGCACGATAA GAAGATGTTA TGA
 
Protein sequence
MGVRLERTSR LFSIHKKLVD TIIDGANKAL ELLISGDRDV IEVMTMTLLV SGVATTISVL 
LGVPLGLWLA LEDFIGKPVL NSVVNFGMGL PPVVVGLVVS LFLWRSGPLG DLDLMYTTTA
MIIAQTIIAF PIVAGFSFAA ILSINPKLRW QLLSMGATPW QAHWLLIKEA RLGLIAAIIA
GFGRVISEVG ASMMVGGNIK GQTRVLTTAI VTEVEKGNFE VAMAIAYILL FITYSIVVSL
TILQHDKKML