| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3918 |
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| Symbol | |
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| ID | 4280809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4678661 |
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| End bp | 4679368 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136739 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_752582 |
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| Protein GI | 114565068 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0186248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGATG GCTGGTTAGC CCTATTGCAG CAAGCATTTA GCTTGCTGCT ATCTTTTGAC
CCACATGTAT GGGCAATTAT TAACATCTCA TTTTCGGTGT CTTTTGCCGC GCTGTTGATC
ACCATTATTC CGTCGATGAT GTTAGGTTTT ATCCTCGCTT TTAGTCATTT CAGAGGCCGC
TGGATCGTCA CTAACTTAGT GCAAACATTG CAATCTATTC CCACTGTAGT GATTGGTTTA
TTAGTGTATT TATTGTTAAC TCGCAATGGT GTCTTAGGCG ATTTAAAGTG GCTATTCACC
CAAAAAGGAA TGATTTTAGG ACAGATGTTA ATTTGCGCTC CAGTATTAAT CGCATTGTCA
CAGGCCGCTT TTGCCAGTGT GGATCGTAGA GCGTGGGAAA CATCTCGTAC ATTAGGAGCC
TCATGGCTAC GCGCGGTTTG GACCTTATGC CGTGAACTAC GAGGCCCCTT ACTGCTCGCC
ATTATCGCAG CGTTTAGTCG CATTTTAACT GAAGTGGGTT GCTCGATGAT GGTTGGTGGC
AATATTATGA ATGTCACCCG TAATATTCCC ACTGCAATAG CACTTGAAAC GAGCAAAGGC
GATTTTGCAC AAGCTATCGC GCTAGGATTA GTCTTATTAA TATTAGCGGT AGTGTTAAAC
TTCATCTTAG GTTCATTGCG AGGCAAAGCC CTCCCAAGGA GTCATTAA
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| Protein sequence | MSDGWLALLQ QAFSLLLSFD PHVWAIINIS FSVSFAALLI TIIPSMMLGF ILAFSHFRGR
WIVTNLVQTL QSIPTVVIGL LVYLLLTRNG VLGDLKWLFT QKGMILGQML ICAPVLIALS
QAAFASVDRR AWETSRTLGA SWLRAVWTLC RELRGPLLLA IIAAFSRILT EVGCSMMVGG
NIMNVTRNIP TAIALETSKG DFAQAIALGL VLLILAVVLN FILGSLRGKA LPRSH
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