Gene Shel_27150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27150 
Symbol 
ID8396603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3000909 
End bp3001655 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID644987457 
ProductABC-type tungstate transport system, periplasmic component 
Protein accessionYP_003145062 
Protein GI257065390 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.544705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTATGA ACGAACTCAT TCAGGCATTC AGCTTGGTGC TCACGCCGGG CAGCGAGTTG 
TCGCAAATCG TCCTTCTGAC CCTTCGGATG TCCGTCTTCT CGACGGTCAT CTCGACTGCG
ATAGGCGTCC CGCTCGGCGT ATGCATCGGG CTGTACCGTT TTCCTGGGAA ACGGCTCGTC
ATGCGCATAC TCAACACACT CATGGGATTG CCGCCGGTAT TGGCGGGTCT CATCGTGTTC
TTCATCCTGT CGCGCTCTGG CCCGCTGGGC ACGCTCAAGC TTCTGTACAG TTTGACAGCC
ATGGTCATCG CCCAGGTGGT GCTTATCACG CCCATCGTTT GCGGCCTTTC CGCCACTGCC
ATCTCCGGCG TGGCGCCTCT CGTGCACGAA ACCGCCCACG GCATGGGGCT CTCGCGCCAC
CACGAATTGC TGTGCCTGCT GTACGAATGC CGCTCCCAAC TGTTCTCCAT CCTGTTTGTA
GCCTTCGGTC GTTCCATCGG CGAAGTGGGC GCGGTCATGC TCGTCGGCGG TAATGTGCAG
TACAAGACCC GCGTCATGAC TACCGCCATC ATGCTTGAAA CGAACATGGG GCACTTCGAA
TACGCCGTCG CTCTGGGCAT CGTGCTGCTC GTCGTGTCAT TCGTCGTCAA CTCCGTGGCC
CTGACGCTGC AGGAGCGCAC AGGCACCACC AAGGTTCAAG GCGCCTGGAG CACATCCCGT
GGCGGGAAGC TGGGAGGCAA AGCATGA
 
Protein sequence
MIMNELIQAF SLVLTPGSEL SQIVLLTLRM SVFSTVISTA IGVPLGVCIG LYRFPGKRLV 
MRILNTLMGL PPVLAGLIVF FILSRSGPLG TLKLLYSLTA MVIAQVVLIT PIVCGLSATA
ISGVAPLVHE TAHGMGLSRH HELLCLLYEC RSQLFSILFV AFGRSIGEVG AVMLVGGNVQ
YKTRVMTTAI MLETNMGHFE YAVALGIVLL VVSFVVNSVA LTLQERTGTT KVQGAWSTSR
GGKLGGKA