Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27150 |
Symbol | |
ID | 8396603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 3000909 |
End bp | 3001655 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987457 |
Product | ABC-type tungstate transport system, periplasmic component |
Protein accession | YP_003145062 |
Protein GI | 257065390 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.544705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATTATGA ACGAACTCAT TCAGGCATTC AGCTTGGTGC TCACGCCGGG CAGCGAGTTG TCGCAAATCG TCCTTCTGAC CCTTCGGATG TCCGTCTTCT CGACGGTCAT CTCGACTGCG ATAGGCGTCC CGCTCGGCGT ATGCATCGGG CTGTACCGTT TTCCTGGGAA ACGGCTCGTC ATGCGCATAC TCAACACACT CATGGGATTG CCGCCGGTAT TGGCGGGTCT CATCGTGTTC TTCATCCTGT CGCGCTCTGG CCCGCTGGGC ACGCTCAAGC TTCTGTACAG TTTGACAGCC ATGGTCATCG CCCAGGTGGT GCTTATCACG CCCATCGTTT GCGGCCTTTC CGCCACTGCC ATCTCCGGCG TGGCGCCTCT CGTGCACGAA ACCGCCCACG GCATGGGGCT CTCGCGCCAC CACGAATTGC TGTGCCTGCT GTACGAATGC CGCTCCCAAC TGTTCTCCAT CCTGTTTGTA GCCTTCGGTC GTTCCATCGG CGAAGTGGGC GCGGTCATGC TCGTCGGCGG TAATGTGCAG TACAAGACCC GCGTCATGAC TACCGCCATC ATGCTTGAAA CGAACATGGG GCACTTCGAA TACGCCGTCG CTCTGGGCAT CGTGCTGCTC GTCGTGTCAT TCGTCGTCAA CTCCGTGGCC CTGACGCTGC AGGAGCGCAC AGGCACCACC AAGGTTCAAG GCGCCTGGAG CACATCCCGT GGCGGGAAGC TGGGAGGCAA AGCATGA
|
Protein sequence | MIMNELIQAF SLVLTPGSEL SQIVLLTLRM SVFSTVISTA IGVPLGVCIG LYRFPGKRLV MRILNTLMGL PPVLAGLIVF FILSRSGPLG TLKLLYSLTA MVIAQVVLIT PIVCGLSATA ISGVAPLVHE TAHGMGLSRH HELLCLLYEC RSQLFSILFV AFGRSIGEVG AVMLVGGNVQ YKTRVMTTAI MLETNMGHFE YAVALGIVLL VVSFVVNSVA LTLQERTGTT KVQGAWSTSR GGKLGGKA
|
| |